Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 IGHV1-14-201ENST00000523391 241 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 OR4H6P-201ENST00000563771 921 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.36□□□□□ -1.23
COL1A1P02452 AL136131.3-201ENST00000607600 188 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 AL450226.2-201ENST00000622913 439 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.36□□□□□ -1.23
COL1A1P02452 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
COL1A1P02452 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
COL1A1P02452 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.35□□□□□ -1.23
COL1A1P02452 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.35□□□□□ -1.23
COL1A1P02452 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.35□□□□□ -1.23
COL1A1P02452 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL1A1P02452 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL1A1P02452 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
COL1A1P02452 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL1A1P02452 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL1A1P02452 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.35□□□□□ -1.23
COL1A1P02452 CCDC162P-202ENST00000368966 6751 ntBASIC7.35□□□□□ -1.23
COL1A1P02452 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
COL1A1P02452 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
COL1A1P02452 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
COL1A1P02452 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.35□□□□□ -1.23
COL1A1P02452 SUMO2P3-201ENST00000438311 288 ntBASIC7.35□□□□□ -1.23
COL1A1P02452 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.35□□□□□ -1.23
COL1A1P02452 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.35□□□□□ -1.23
COL1A1P02452 AC026348.1-201ENST00000462549 1053 ntBASIC7.35□□□□□ -1.23
COL1A1P02452 AL122020.1-201ENST00000472287 459 ntBASIC7.35□□□□□ -1.23
COL1A1P02452 AC106872.5-201ENST00000508856 1416 ntBASIC7.35□□□□□ -1.23
COL1A1P02452 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.35□□□□□ -1.23
COL1A1P02452 AC112191.2-201ENST00000522428 333 ntBASIC7.35□□□□□ -1.23
COL1A1P02452 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL1A1P02452 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.35□□□□□ -1.23
COL1A1P02452 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.35□□□□□ -1.23
COL1A1P02452 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.35□□□□□ -1.23
COL1A1P02452 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.35□□□□□ -1.23
COL1A1P02452 AC091078.2-201ENST00000557145 559 ntBASIC7.35□□□□□ -1.23
COL1A1P02452 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.35□□□□□ -1.23
COL1A1P02452 AC005244.1-201ENST00000582566 339 ntBASIC7.35□□□□□ -1.23
COL1A1P02452 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL1A1P02452 AC005034.3-201ENST00000604845 1747 ntBASIC7.35□□□□□ -1.23
COL1A1P02452 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.35□□□□□ -1.23
COL1A1P02452 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.35□□□□□ -1.23
COL1A1P02452 AL021918.2-201ENST00000613415 194 ntBASIC7.35□□□□□ -1.23
COL1A1P02452 MAPK10-261ENST00000641050 3109 ntBASIC7.35□□□□□ -1.23
COL1A1P02452 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.35□□□□□ -1.23
COL1A1P02452 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL1A1P02452 Z93929.1-201ENST00000418200 1475 ntBASIC7.34□□□□□ -1.23
COL1A1P02452 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL1A1P02452 LINC01616-201ENST00000561816 2280 ntBASIC7.34□□□□□ -1.23
COL1A1P02452 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL1A1P02452 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.34□□□□□ -1.23
COL1A1P02452 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
COL1A1P02452 GNL2P1-201ENST00000451274 2190 ntBASIC7.34□□□□□ -1.23
COL1A1P02452 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL1A1P02452 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.23
COL1A1P02452 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL1A1P02452 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL1A1P02452 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
COL1A1P02452 AL008638.3-201ENST00000623027 5182 ntBASIC7.34□□□□□ -1.23
COL1A1P02452 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.34□□□□□ -1.23
COL1A1P02452 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.34□□□□□ -1.23
COL1A1P02452 AC093155.2-201ENST00000420734 937 ntBASIC7.34□□□□□ -1.23
COL1A1P02452 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.34□□□□□ -1.23
COL1A1P02452 AL022237.1-201ENST00000446663 358 ntBASIC7.34□□□□□ -1.23
COL1A1P02452 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.34□□□□□ -1.23
COL1A1P02452 AC093166.4-201ENST00000457867 318 ntBASIC7.34□□□□□ -1.23
COL1A1P02452 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.34□□□□□ -1.23
COL1A1P02452 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.34□□□□□ -1.23
COL1A1P02452 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.34□□□□□ -1.23
COL1A1P02452 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.34□□□□□ -1.23
COL1A1P02452 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.34□□□□□ -1.23
COL1A1P02452 TCL6_3.1-201ENST00000619064 137 ntBASIC7.34□□□□□ -1.23
COL1A1P02452 AC069234.4-201ENST00000621276 412 ntBASIC7.34□□□□□ -1.23
COL1A1P02452 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
COL1A1P02452 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL1A1P02452 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL1A1P02452 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
COL1A1P02452 AP002833.3-201ENST00000625075 2265 ntBASIC7.33□□□□□ -1.24
COL1A1P02452 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.33□□□□□ -1.24
COL1A1P02452 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.33□□□□□ -1.24
COL1A1P02452 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
COL1A1P02452 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
COL1A1P02452 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.33□□□□□ -1.24
COL1A1P02452 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.33□□□□□ -1.24
COL1A1P02452 RN7SKP77-201ENST00000363261 353 ntBASIC7.33□□□□□ -1.24
COL1A1P02452 RNA5SP333-201ENST00000363466 118 ntBASIC7.33□□□□□ -1.24
COL1A1P02452 RNA5SP334-201ENST00000364825 118 ntBASIC7.33□□□□□ -1.24
COL1A1P02452 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
COL1A1P02452 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.33□□□□□ -1.24
COL1A1P02452 GTF3AP1-201ENST00000416942 1004 ntBASIC7.33□□□□□ -1.24
COL1A1P02452 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.33□□□□□ -1.24
COL1A1P02452 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.33□□□□□ -1.24
COL1A1P02452 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.33□□□□□ -1.24
COL1A1P02452 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.33□□□□□ -1.24
COL1A1P02452 AC112187.1-201ENST00000455837 479 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms