Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TNFP01375 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFP01375 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.04□□□□□ -1.44
TNFP01375 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.04□□□□□ -1.44
TNFP01375 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFP01375 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFP01375 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
TNFP01375 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TNFP01375 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
TNFP01375 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
TNFP01375 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFP01375 AL137918.1-201ENST00000624542 1922 ntBASIC6.03□□□□□ -1.44
TNFP01375 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
TNFP01375 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFP01375 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFP01375 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFP01375 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFP01375 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFP01375 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFP01375 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.03□□□□□ -1.44
TNFP01375 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
TNFP01375 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFP01375 RN7SKP269-201ENST00000365545 319 ntBASIC6.03□□□□□ -1.44
TNFP01375 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFP01375 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.03□□□□□ -1.44
TNFP01375 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.03□□□□□ -1.44
TNFP01375 ZNF619P1-201ENST00000446539 752 ntBASIC6.03□□□□□ -1.44
TNFP01375 CST12P-201ENST00000457644 362 ntBASIC6.03□□□□□ -1.44
TNFP01375 AC084754.1-201ENST00000463466 464 ntBASIC6.03□□□□□ -1.44
TNFP01375 RN7SL221P-201ENST00000466190 281 ntBASIC6.03□□□□□ -1.44
TNFP01375 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.03□□□□□ -1.44
TNFP01375 AC073581.1-201ENST00000519036 575 ntBASIC6.03□□□□□ -1.44
TNFP01375 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.03□□□□□ -1.44
TNFP01375 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFP01375 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.03□□□□□ -1.44
TNFP01375 AC027229.1-201ENST00000583887 253 ntBASIC6.03□□□□□ -1.44
TNFP01375 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFP01375 AP002345.2-201ENST00000609961 904 ntBASIC6.03□□□□□ -1.44
TNFP01375 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.03□□□□□ -1.44
TNFP01375 AC096708.4-201ENST00000620563 552 ntBASIC6.03□□□□□ -1.44
TNFP01375 FO681491.1-202ENST00000623392 737 ntBASIC6.03□□□□□ -1.44
TNFP01375 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFP01375 OR7A1P-202ENST00000641542 1158 ntBASIC6.03□□□□□ -1.44
TNFP01375 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFP01375 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.03□□□□□ -1.44
TNFP01375 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.03□□□□□ -1.44
TNFP01375 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.03□□□□□ -1.44
TNFP01375 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFP01375 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFP01375 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TNFP01375 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TNFP01375 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.02□□□□□ -1.44
TNFP01375 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.02□□□□□ -1.44
TNFP01375 AL359091.1-201ENST00000449048 1734 ntBASIC6.02□□□□□ -1.45
TNFP01375 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
TNFP01375 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC6.02□□□□□ -1.45
TNFP01375 AC011369.2-201ENST00000624423 1567 ntBASIC6.02□□□□□ -1.45
TNFP01375 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.02□□□□□ -1.45
TNFP01375 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.02□□□□□ -1.45
TNFP01375 AP001541.1-201ENST00000623322 1904 ntBASIC6.02□□□□□ -1.45
TNFP01375 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.02□□□□□ -1.45
TNFP01375 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.02□□□□□ -1.45
TNFP01375 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.02□□□□□ -1.45
TNFP01375 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.02□□□□□ -1.45
TNFP01375 RNA5SP435-201ENST00000364044 108 ntBASIC6.02□□□□□ -1.45
TNFP01375 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TNFP01375 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 AL096829.1-201ENST00000413677 457 ntBASIC6.02□□□□□ -1.45
TNFP01375 SLC20A1P1-201ENST00000413906 956 ntBASIC6.02□□□□□ -1.45
TNFP01375 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.02□□□□□ -1.45
TNFP01375 RPS3P2-201ENST00000421346 701 ntBASIC6.02□□□□□ -1.45
TNFP01375 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.02□□□□□ -1.45
TNFP01375 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.02□□□□□ -1.45
TNFP01375 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.02□□□□□ -1.45
TNFP01375 AC006499.4-201ENST00000510947 694 ntBASIC6.02□□□□□ -1.45
TNFP01375 RNA5SP271-201ENST00000516700 88 ntBASIC6.02□□□□□ -1.45
TNFP01375 AC060775.1-201ENST00000518241 520 ntBASIC6.02□□□□□ -1.45
TNFP01375 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.02□□□□□ -1.45
TNFP01375 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.02□□□□□ -1.45
TNFP01375 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.02□□□□□ -1.45
TNFP01375 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.02□□□□□ -1.45
TNFP01375 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.02□□□□□ -1.45
TNFP01375 AL513218.1-201ENST00000606527 391 ntBASIC6.02□□□□□ -1.45
TNFP01375 AC141002.1-201ENST00000607025 279 ntBASIC6.02□□□□□ -1.45
TNFP01375 TCL6_3.1-201ENST00000619064 137 ntBASIC6.02□□□□□ -1.45
TNFP01375 SNX18P12-201ENST00000624821 759 ntBASIC6.02□□□□□ -1.45
TNFP01375 AC129915.3-201ENST00000634128 948 ntBASIC6.02□□□□□ -1.45
TNFP01375 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.02□□□□□ -1.45
TNFP01375 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TNFP01375 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.02□□□□□ -1.45
TNFP01375 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TNFP01375 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms