Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RN7SKP196-201ENST00000516267 345 ntBASIC5.82□□□□□ -1.48
SSX4O60224 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX4O60224 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX4O60224 OR52K3P-201ENST00000531655 943 ntBASIC5.82□□□□□ -1.48
SSX4O60224 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.82□□□□□ -1.48
SSX4O60224 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX4O60224 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.82□□□□□ -1.48
SSX4O60224 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.82□□□□□ -1.48
SSX4O60224 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
SSX4O60224 AC012175.1-201ENST00000603755 531 ntBASIC5.82□□□□□ -1.48
SSX4O60224 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX4O60224 AL359091.2-201ENST00000609303 556 ntBASIC5.82□□□□□ -1.48
SSX4O60224 CXADRP3-202ENST00000617265 1100 ntBASIC5.82□□□□□ -1.48
SSX4O60224 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX4O60224 AL162377.2-201ENST00000624532 337 ntBASIC5.82□□□□□ -1.48
SSX4O60224 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SSX4O60224 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX4O60224 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX4O60224 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX4O60224 MSL3P1-202ENST00000440028 1468 ntBASIC5.82□□□□□ -1.48
SSX4O60224 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
SSX4O60224 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX4O60224 CDY11P-201ENST00000447168 1651 ntBASIC5.82□□□□□ -1.48
SSX4O60224 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX4O60224 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.81□□□□□ -1.48
SSX4O60224 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX4O60224 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SSX4O60224 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX4O60224 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SSX4O60224 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX4O60224 RN7SKP47-201ENST00000365347 328 ntBASIC5.81□□□□□ -1.48
SSX4O60224 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 FDPSP5-201ENST00000399474 1057 ntBASIC5.81□□□□□ -1.48
SSX4O60224 AL133260.1-201ENST00000405720 405 ntBASIC5.81□□□□□ -1.48
SSX4O60224 AL359885.1-201ENST00000415786 903 ntBASIC5.81□□□□□ -1.48
SSX4O60224 AL139415.1-201ENST00000424862 352 ntBASIC5.81□□□□□ -1.48
SSX4O60224 AC092651.1-201ENST00000426110 312 ntBASIC5.81□□□□□ -1.48
SSX4O60224 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX4O60224 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX4O60224 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SSX4O60224 OR52I1-201ENST00000450052 1050 ntBASIC5.81□□□□□ -1.48
SSX4O60224 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX4O60224 AKR1D1P1-201ENST00000457236 936 ntBASIC5.81□□□□□ -1.48
SSX4O60224 MARK2P8-201ENST00000476069 952 ntBASIC5.81□□□□□ -1.48
SSX4O60224 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX4O60224 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.81□□□□□ -1.48
SSX4O60224 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX4O60224 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.81□□□□□ -1.48
SSX4O60224 SETP17-201ENST00000534163 817 ntBASIC5.81□□□□□ -1.48
SSX4O60224 NXPE2P1-201ENST00000543705 726 ntBASIC5.81□□□□□ -1.48
SSX4O60224 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.81□□□□□ -1.48
SSX4O60224 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX4O60224 AC107958.1-201ENST00000556576 290 ntBASIC5.81□□□□□ -1.48
SSX4O60224 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX4O60224 AC004232.2-201ENST00000574245 821 ntBASIC5.81□□□□□ -1.48
SSX4O60224 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.81□□□□□ -1.48
SSX4O60224 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.81□□□□□ -1.48
SSX4O60224 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.81□□□□□ -1.48
SSX4O60224 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX4O60224 AL583832.1-201ENST00000603227 784 ntBASIC5.81□□□□□ -1.48
SSX4O60224 AC007255.2-201ENST00000604053 631 ntBASIC5.81□□□□□ -1.48
SSX4O60224 BX322635.1-201ENST00000605804 496 ntBASIC5.81□□□□□ -1.48
SSX4O60224 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX4O60224 AC010998.3-201ENST00000613871 631 ntBASIC5.81□□□□□ -1.48
SSX4O60224 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.81□□□□□ -1.48
SSX4O60224 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.81□□□□□ -1.48
SSX4O60224 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX4O60224 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SSX4O60224 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 RACGAP1P-201ENST00000550663 1879 ntBASIC5.81□□□□□ -1.48
SSX4O60224 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SSX4O60224 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX4O60224 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 AC119674.1-213ENST00000641177 1386 ntBASIC5.8□□□□□ -1.48
SSX4O60224 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX4O60224 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SSX4O60224 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.8□□□□□ -1.48
SSX4O60224 AC129502.1-201ENST00000623261 1654 ntBASIC5.8□□□□□ -1.48
SSX4O60224 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSX4O60224 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms