Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SLC28A1O00337 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.96□□□□□ -1.46
SLC28A1O00337 AL365220.1-201ENST00000432923 399 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 AL731534.1-201ENST00000434711 269 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 NPM1P48-201ENST00000436002 853 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 PPIAP10-201ENST00000438675 458 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 SOCS5P1-201ENST00000440415 949 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.96□□□□□ -1.46
SLC28A1O00337 HMGN1P32-201ENST00000441744 256 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 GAPDHP23-201ENST00000444823 993 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 POU5F1P5-201ENST00000445059 658 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 AL034369.1-201ENST00000453808 477 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 AP003385.3-201ENST00000472498 287 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 RN7SL790P-201ENST00000474043 298 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.96□□□□□ -1.46
SLC28A1O00337 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SLC28A1O00337 AP001858.2-201ENST00000536213 601 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 AC092865.1-201ENST00000544395 1023 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.96□□□□□ -1.46
SLC28A1O00337 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SLC28A1O00337 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.96□□□□□ -1.46
SLC28A1O00337 AC139792.1-201ENST00000607051 647 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.96□□□□□ -1.46
SLC28A1O00337 MIR6070-201ENST00000613967 103 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 AL137067.2-201ENST00000621202 131 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.96□□□□□ -1.46
SLC28A1O00337 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.96□□□□□ -1.46
SLC28A1O00337 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
SLC28A1O00337 OR7A1P-202ENST00000641542 1158 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SLC28A1O00337 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC28A1O00337 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.96□□□□□ -1.46
SLC28A1O00337 AL137058.3-201ENST00000624531 3099 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.96□□□□□ -1.46
SLC28A1O00337 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SLC28A1O00337 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC28A1O00337 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.96□□□□□ -1.46
SLC28A1O00337 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SLC28A1O00337 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC28A1O00337 AP000432.2-201ENST00000624164 2048 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SLC28A1O00337 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC28A1O00337 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
SLC28A1O00337 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SLC28A1O00337 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC28A1O00337 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.95□□□□□ -1.46
SLC28A1O00337 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SLC28A1O00337 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC28A1O00337 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC28A1O00337 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC28A1O00337 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC28A1O00337 SNORD1C-201ENST00000363315 78 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 RNU1-49P-201ENST00000363468 159 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 RNA5SP485-201ENST00000365053 119 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SLC28A1O00337 RN7SKP121-201ENST00000410842 305 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 DHFRP2-201ENST00000414224 547 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC28A1O00337 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.95□□□□□ -1.46
SLC28A1O00337 RPS7P14-201ENST00000426405 583 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 AL354893.1-201ENST00000433735 348 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 BX679664.2-201ENST00000439282 283 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC28A1O00337 RPL23AP60-201ENST00000450011 454 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.95□□□□□ -1.46
SLC28A1O00337 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC28A1O00337 GM2AP2-201ENST00000491764 562 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 SNX18P24-201ENST00000505249 671 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 OR4D12P-201ENST00000509361 911 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SLC28A1O00337 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.95□□□□□ -1.46
SLC28A1O00337 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC28A1O00337 AC037479.1-201ENST00000558361 625 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC28A1O00337 AC027796.1-201ENST00000575593 512 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 MIR4732-201ENST00000581873 76 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 AC090774.2-201ENST00000584708 322 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 MIR132-201ENST00000591554 101 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC28A1O00337 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.95□□□□□ -1.46
SLC28A1O00337 AL591222.2-201ENST00000604443 754 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 AL390877.1-201ENST00000605704 214 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 AL132656.3-201ENST00000606384 1595 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 AC022960.2-201ENST00000616300 666 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 AC092724.1-201ENST00000624623 3397 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.95□□□□□ -1.46
SLC28A1O00337 CLUHP10-201ENST00000631979 980 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SLC28A1O00337 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.95□□□□□ -1.46
SLC28A1O00337 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.95□□□□□ -1.46
SLC28A1O00337 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SLC28A1O00337 AC024651.2-201ENST00000562480 2098 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.95□□□□□ -1.46
SLC28A1O00337 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.95□□□□□ -1.46
SLC28A1O00337 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.95□□□□□ -1.46
SLC28A1O00337 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC28A1O00337 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SLC28A1O00337 AC120036.2-201ENST00000509729 1474 ntBASIC5.95□□□□□ -1.46
SLC28A1O00337 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms