Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.82□□□□□ -1.48
UPK1AO00322 Z82198.3-201ENST00000421145 199 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.82□□□□□ -1.48
UPK1AO00322 AC094019.1-201ENST00000434678 472 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.82□□□□□ -1.48
UPK1AO00322 AL451063.1-201ENST00000450164 1133 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 AL133351.3-201ENST00000454998 193 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.82□□□□□ -1.48
UPK1AO00322 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.82□□□□□ -1.48
UPK1AO00322 RN7SL104P-201ENST00000498686 293 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.82□□□□□ -1.48
UPK1AO00322 OR6M2P-201ENST00000529831 871 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 AP001858.2-201ENST00000536213 601 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.82□□□□□ -1.48
UPK1AO00322 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.82□□□□□ -1.48
UPK1AO00322 MIR744-201ENST00000578242 98 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.82□□□□□ -1.48
UPK1AO00322 NDUFB9P1-201ENST00000604683 510 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.82□□□□□ -1.48
UPK1AO00322 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.82□□□□□ -1.48
UPK1AO00322 AL591167.1-201ENST00000607321 456 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.82□□□□□ -1.48
UPK1AO00322 OR7A1P-202ENST00000641542 1158 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.82□□□□□ -1.48
UPK1AO00322 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.82□□□□□ -1.48
UPK1AO00322 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
UPK1AO00322 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
UPK1AO00322 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.82□□□□□ -1.48
UPK1AO00322 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 AC063923.1-201ENST00000478982 1619 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
UPK1AO00322 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 RNA5SP346-201ENST00000363541 121 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 SNORA43.1-201ENST00000364863 140 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
UPK1AO00322 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 AL034417.1-201ENST00000399343 800 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.81□□□□□ -1.48
UPK1AO00322 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.81□□□□□ -1.48
UPK1AO00322 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.81□□□□□ -1.48
UPK1AO00322 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 AL731534.1-201ENST00000434711 269 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 LINC00328-2P-201ENST00000436585 219 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 PPIAP10-201ENST00000438675 458 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.81□□□□□ -1.48
UPK1AO00322 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 AC073594.1-201ENST00000462065 364 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.81□□□□□ -1.48
UPK1AO00322 AC092865.1-201ENST00000544395 1023 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.81□□□□□ -1.48
UPK1AO00322 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.81□□□□□ -1.48
UPK1AO00322 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.81□□□□□ -1.48
UPK1AO00322 AC005632.2-201ENST00000564271 828 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 WBP1LP11-201ENST00000586141 328 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 AC015819.1-201ENST00000613588 663 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 AL031658.2-201ENST00000616850 651 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.81□□□□□ -1.48
UPK1AO00322 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.81□□□□□ -1.48
UPK1AO00322 AL049634.1-201ENST00000453770 1720 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
UPK1AO00322 AL161901.1-201ENST00000624954 3425 ntBASIC5.81□□□□□ -1.48
UPK1AO00322 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC5.81□□□□□ -1.48
UPK1AO00322 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UPK1AO00322 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
UPK1AO00322 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.81□□□□□ -1.48
UPK1AO00322 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.8□□□□□ -1.48
UPK1AO00322 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 AC079753.1-201ENST00000623243 3868 ntBASIC5.8□□□□□ -1.48
UPK1AO00322 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UPK1AO00322 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms