Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 SNORD16-201ENST00000362803 99 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AL157702.1-201ENST00000398764 426 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AMYP1-201ENST00000440059 1023 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 PMS2P9-201ENST00000441237 515 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 RPS15AP29-201ENST00000445539 400 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AL358876.1-201ENST00000453364 1075 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 IGHV3-57-201ENST00000520143 280 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AC015818.6-201ENST00000584274 634 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AL162233.1-201ENST00000620014 944 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AC012653.2-201ENST00000621880 420 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AL138960.2-201ENST00000625145 535 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AC073488.6-201ENST00000632293 754 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 AP004289.1-201ENST00000436307 2205 ntBASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 CUBNP3-201ENST00000457461 1784 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 Z93929.1-201ENST00000418200 1475 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AC104966.1-201ENST00000467010 1464 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AC083806.2-201ENST00000617795 2685 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 Y_RNA.110-201ENST00000363220 99 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 RN7SKP240-201ENST00000410583 375 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 MTND4LP21-201ENST00000415303 295 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 OR52I1-201ENST00000450052 1050 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 C1DP3-201ENST00000455013 423 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 CYCSP53-201ENST00000455540 265 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 RPL23AP64-201ENST00000469465 435 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 RPL12P30-201ENST00000488389 499 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 RNA5SP206-201ENST00000516703 121 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AL359742.1-201ENST00000622497 540 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 AC007114.2-201ENST00000576014 4281 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 LPAL2-203ENST00000454031 2498 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms