Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 UBBP5-201ENST00000446970 266 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 RNU7-157P-201ENST00000459600 66 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC126615.1-201ENST00000470084 630 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 RPS26P24-201ENST00000497656 331 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC010442.1-201ENST00000515583 816 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC069240.2-201ENST00000550242 609 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC010503.3-201ENST00000594355 540 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 PRR13P3-201ENST00000603578 376 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC004890.3-201ENST00000605566 1095 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC138965.3-201ENST00000623875 498 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC073488.9-201ENST00000631601 754 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AC079248.1-201ENST00000427568 1546 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AL355488.2-201ENST00000609909 2850 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AL121768.1-201ENST00000613917 2544 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 AL359955.1-201ENST00000455242 3275 ntBASIC5.21□□□□□ -1.58
KCNIP3Q9Y2W7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AL359091.1-201ENST00000449048 1734 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 GVINP1-202ENST00000531871 7271 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC109446.4-201ENST00000623235 2755 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC074375.1-201ENST00000372993 192 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 MIR99A-201ENST00000384906 81 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 RANP6-201ENST00000413691 644 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AL157884.1-201ENST00000424561 454 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC092651.1-201ENST00000426110 312 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 ETF1P1-206ENST00000427296 984 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 NPM1P48-201ENST00000436002 853 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC007790.1-201ENST00000439081 782 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 RPS4XP19-201ENST00000460237 736 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 RPS16P9-201ENST00000477220 427 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC135999.1-201ENST00000478962 479 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 RN7SL314P-201ENST00000490735 292 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC008945.1-201ENST00000505144 499 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 CIPC-206ENST00000555611 599 ntTSL 4 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AL132640.2-202ENST00000559732 614 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 NPM1P42-201ENST00000560329 862 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC012510.1-201ENST00000607946 759 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AL121782.1-201ENST00000611242 413 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC005858.3-201ENST00000624756 589 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC000095.2-202ENST00000637415 154 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 MAPK10-350ENST00000641777 965 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AP001541.1-201ENST00000623322 1904 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 AC092701.1-201ENST00000623627 1551 ntBASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KCNIP3Q9Y2W7 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
KCNIP3Q9Y2W7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms