Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SATB2Q9UPW6 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SATB2Q9UPW6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SATB2Q9UPW6 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 FO082842.1-201ENST00000423552 1370 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 Z97989.1-201ENST00000531702 2421 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 NEK2P4-201ENST00000425793 1329 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AL512310.3-201ENST00000547023 1335 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 RN7SL254P-201ENST00000460609 284 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 SNX18P25-201ENST00000510539 758 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC073581.1-201ENST00000519036 575 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 RPL3P13-201ENST00000550415 216 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC023389.2-201ENST00000580031 955 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AL138895.2-201ENST00000603019 178 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC124916.2-201ENST00000604416 224 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC025171.4-201ENST00000607250 1047 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC093635.1-201ENST00000609028 555 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC010333.3-201ENST00000615100 402 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC139426.3-201ENST00000605648 2059 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 CDY5P-201ENST00000411487 1580 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 CDY9P-201ENST00000451397 1580 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 AC093278.2-201ENST00000564956 2485 ntBASIC6.35□□□□□ -1.39
SATB2Q9UPW6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SATB2Q9UPW6 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 NLRP3P1-201ENST00000622303 1785 ntBASIC6.34□□□□□ -1.39
SATB2Q9UPW6 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 SNORA70.3-201ENST00000365075 132 ntBASIC6.34□□□□□ -1.39
SATB2Q9UPW6 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 MRPS6P2-201ENST00000381143 370 ntBASIC6.34□□□□□ -1.39
SATB2Q9UPW6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 BTG3P1-201ENST00000435859 716 ntBASIC6.34□□□□□ -1.39
SATB2Q9UPW6 AMYP1-201ENST00000440059 1023 ntBASIC6.34□□□□□ -1.39
SATB2Q9UPW6 DNAJA1P5-201ENST00000440278 943 ntBASIC6.34□□□□□ -1.39
SATB2Q9UPW6 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 PPIAP20-201ENST00000449839 135 ntBASIC6.34□□□□□ -1.39
SATB2Q9UPW6 HMGB1P7-201ENST00000450921 612 ntBASIC6.34□□□□□ -1.39
SATB2Q9UPW6 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 AC108103.1-201ENST00000511286 446 ntBASIC6.34□□□□□ -1.39
SATB2Q9UPW6 HMGN1P17-201ENST00000513734 295 ntBASIC6.34□□□□□ -1.39
SATB2Q9UPW6 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.34□□□□□ -1.39
SATB2Q9UPW6 NPIPB14P-203ENST00000532298 987 ntBASIC6.34□□□□□ -1.39
SATB2Q9UPW6 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms