Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC112187.1-201ENST00000455837 479 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC108751.3-201ENST00000461814 1020 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 RPS7P11-201ENST00000484240 586 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 CR383656.1-201ENST00000484916 377 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC137549.1-201ENST00000514243 533 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 Vault.2-201ENST00000516519 98 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 IGHVII-51-2-201ENST00000519778 259 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 KCTD9P6-201ENST00000522306 950 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 CIPC-206ENST00000555611 599 ntTSL 4 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 MIR132-201ENST00000591554 101 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC245052.7-201ENST00000601161 359 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AL713998.2-201ENST00000604538 1198 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC019257.2-201ENST00000605539 497 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC092451.3-201ENST00000625067 1343 ntBASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.14□□□□□ -1.75
SND1-IT1Q9HBX3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 RNA5SP152-201ENST00000365184 110 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 RNA5SP355-201ENST00000365317 135 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 RNA5SP427-201ENST00000365323 119 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC074375.1-201ENST00000372993 192 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 MIR187-201ENST00000385062 109 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL079341.1-201ENST00000404701 1207 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 RN7SKP30-201ENST00000411373 334 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 RANP6-201ENST00000413691 644 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 MTND4LP21-201ENST00000415303 295 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 SMARCE1P1-201ENST00000417747 1186 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 MTND1P10-201ENST00000426108 832 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL354893.1-201ENST00000433735 348 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL731534.1-201ENST00000434711 269 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 RPS3AP38-201ENST00000435889 763 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 PHBP4-201ENST00000437447 837 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC092421.1-201ENST00000448148 418 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 Z83838.1-202ENST00000456225 839 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 SNRPCP3-201ENST00000474888 476 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 RN7SL868P-201ENST00000485915 303 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms