Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 AC016583.1-201ENST00000624221 2431 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 SNORA77.2-201ENST00000408571 112 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 PTPN2P1-201ENST00000423212 1072 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 AL592114.2-201ENST00000440142 532 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 RPS7P4-201ENST00000444127 582 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 AC018645.1-201ENST00000505003 109 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 AC093816.1-201ENST00000515076 913 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 AC136777.2-201ENST00000522979 358 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 AC244502.2-201ENST00000543361 851 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 MRPL45P2-203ENST00000573318 473 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 AL031429.2-201ENST00000602605 649 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 VN2R1P-201ENST00000449668 1743 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 WDR95P-201ENST00000425638 1542 ntBASIC7.46□□□□□ -1.22
UPF2Q9HAU5 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
UPF2Q9HAU5 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 OR7A2P-201ENST00000304105 930 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 EMC3-AS1-205ENST00000438698 534 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 CUBNP2-201ENST00000443534 1139 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 TOMM22P4-201ENST00000511318 336 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AP001994.1-201ENST00000527539 826 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AC006120.1-201ENST00000579375 546 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 RNU4ATAC-201ENST00000580972 127 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 RN7SL475P-201ENST00000583379 298 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 RPL7AP69-201ENST00000595306 806 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AC010998.3-201ENST00000613871 631 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AL121985.3-201ENST00000620690 523 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AC006453.3-201ENST00000635891 377 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AL022311.1-201ENST00000623726 19416 ntBASIC7.45□□□□□ -1.22
UPF2Q9HAU5 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.45□□□□□ -1.22
UPF2Q9HAU5 AC087516.1-201ENST00000561236 2428 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AC140134.1-201ENST00000511830 3544 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 ZNF969P-201ENST00000510345 2341 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AL355488.2-201ENST00000609909 2850 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AL161756.3-201ENST00000641216 2071 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 RN7SKP166-201ENST00000410812 305 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 PPIAP23-201ENST00000420099 497 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AC013403.1-201ENST00000436954 263 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 PPIAP10-201ENST00000438675 458 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AC023080.1-201ENST00000551663 931 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 MIR6736-201ENST00000616799 59 ntBASIC7.44□□□□□ -1.22
UPF2Q9HAU5 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms