Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC017037.1-201ENST00000508460 471 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 FABP5P6-201ENST00000510588 409 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 PTTG3P-201ENST00000521862 606 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AP006245.2-201ENST00000522004 300 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC069240.2-201ENST00000550242 609 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC087477.6-201ENST00000559595 843 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 HERC2P5-201ENST00000562687 3825 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 MIR4789-201ENST00000577469 82 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AL353726.1-201ENST00000614041 1000 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC026108.1-201ENST00000635444 547 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC087045.3-201ENST00000623046 2468 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 TPTE-201ENST00000427445 2036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 LRRC4C-203ENST00000528697 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 ARMC4-201ENST00000305242 3572 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC120114.2-201ENST00000567795 2272 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 DCX-210ENST00000637453 2275 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 TDGF1-201ENST00000296145 2513 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 LINC02181-201ENST00000430050 4083 ntTSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 MT-RNR2-201ENST00000387347 1559 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 RIPOR2-202ENST00000378023 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 LINC00663-203ENST00000586885 2546 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 NACA3P-201ENST00000359690 648 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 Y_RNA.216-201ENST00000364205 93 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 RNU1-55P-201ENST00000365510 158 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AL355862.1-201ENST00000412705 353 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 MTCO3P12-201ENST00000416718 547 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC234782.3-201ENST00000461229 433 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 RPL5P13-201ENST00000462840 709 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC023245.1-201ENST00000468501 517 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 DEFB109A-201ENST00000482450 265 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC109462.1-201ENST00000491087 368 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 RPS27P20-201ENST00000492051 246 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC015864.1-201ENST00000496512 544 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 RNA5SP303-201ENST00000516192 130 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 IGHVIV-44-1-201ENST00000519334 338 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AP000445.1-201ENST00000526692 741 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 DEFB130C-202ENST00000530001 230 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 HIGD1AP17-201ENST00000554576 276 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 RN7SL199P-201ENST00000578752 281 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 RN7SL656P-201ENST00000579044 281 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 RN7SL270P-201ENST00000579643 281 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 MIR3614-201ENST00000581261 86 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 GMFG-204ENST00000595636 487 ntTSL 2 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC012368.3-201ENST00000604190 219 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC019193.2-201ENST00000610012 634 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms