Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX18Q96RF0 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC093524.1-201ENST00000564266 1094 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC027281.1-201ENST00000574178 758 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 AL035410.2-201ENST00000604963 864 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNX18Q96RF0 CR589904.2-201ENST00000612533 440 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC048341.3-201ENST00000619323 491 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 AC026108.1-201ENST00000635444 547 ntBASIC6.09□□□□□ -1.43
SNX18Q96RF0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SNX18Q96RF0 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.09□□□□□ -1.44
SNX18Q96RF0 AC018628.1-201ENST00000624147 3819 ntBASIC6.09□□□□□ -1.44
SNX18Q96RF0 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SNX18Q96RF0 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SNX18Q96RF0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX18Q96RF0 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AL451064.2-201ENST00000623514 1654 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC110792.3-201ENST00000595906 1614 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 CASC19-261ENST00000641853 1638 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC087565.3-202ENST00000642085 1603 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX18Q96RF0 OR2M1P-201ENST00000318104 951 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX18Q96RF0 RN7SKP186-201ENST00000365371 303 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX18Q96RF0 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX18Q96RF0 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX18Q96RF0 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 OR51A6P-201ENST00000418680 1004 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 BX679664.2-201ENST00000439282 283 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC027124.1-201ENST00000440852 466 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 PA2G4P1-201ENST00000442248 1197 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 TXNP2-201ENST00000443918 295 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 RN7SL518P-201ENST00000491887 280 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 NPM1P52-201ENST00000518264 846 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 VTA1P2-201ENST00000520205 911 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 RN7SL270P-201ENST00000579643 281 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC011447.2-201ENST00000592921 283 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 MTATP6P2-201ENST00000603319 678 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX18Q96RF0 AP000943.4-201ENST00000622912 357 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 AL512329.1-201ENST00000404600 1592 ntBASIC6.08□□□□□ -1.44
SNX18Q96RF0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX18Q96RF0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX18Q96RF0 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX18Q96RF0 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX18Q96RF0 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNX18Q96RF0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SNX18Q96RF0 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNX18Q96RF0 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SNX18Q96RF0 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.07□□□□□ -1.44
SNX18Q96RF0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX18Q96RF0 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX18Q96RF0 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SNX18Q96RF0 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX18Q96RF0 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX18Q96RF0 OR4K17-201ENST00000315543 1032 ntBASIC6.07□□□□□ -1.44
SNX18Q96RF0 OR10D1P-201ENST00000355343 936 ntBASIC6.07□□□□□ -1.44
SNX18Q96RF0 RNA5SP188-201ENST00000362916 129 ntBASIC6.07□□□□□ -1.44
SNX18Q96RF0 SNORA70.3-201ENST00000365075 132 ntBASIC6.07□□□□□ -1.44
SNX18Q96RF0 AL353625.1-202ENST00000366273 571 ntBASIC6.07□□□□□ -1.44
SNX18Q96RF0 RNA5SP280-201ENST00000411230 115 ntBASIC6.07□□□□□ -1.44
SNX18Q96RF0 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms