Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MIR365B-201ENST00000362317 111 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 LCN1P2-201ENST00000372030 223 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTP4A1Q93096 RNU6-1263P-201ENST00000384601 106 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 RN7SKP91-201ENST00000410852 288 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 RN7SKP161-201ENST00000411110 305 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 OR52N3P-201ENST00000413417 934 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTP4A1Q93096 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 RCC2P2-201ENST00000422174 918 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 SPATA20P1-201ENST00000423089 438 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 HMGB1P32-201ENST00000425971 565 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 SLAMF6P1-201ENST00000451067 602 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 RBMY2TP-201ENST00000451162 947 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 SNX18P26-201ENST00000458433 740 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 SEPT7P6-201ENST00000469999 1143 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC099340.1-201ENST00000475247 599 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 OR11I1P-201ENST00000486033 954 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 AL079303.1-201ENST00000486611 463 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC018639.1-201ENST00000492994 442 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 RPL5P14-201ENST00000494197 878 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC093878.1-201ENST00000515630 432 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 SCARNA11.1-201ENST00000516918 132 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTP4A1Q93096 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 AL358913.1-201ENST00000554342 121 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 MIR4312-201ENST00000579909 76 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTP4A1Q93096 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 AL109924.4-201ENST00000623089 670 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTP4A1Q93096 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTP4A1Q93096 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 OR10AB1P-202ENST00000641219 1686 ntBASIC5.81□□□□□ -1.48
PTP4A1Q93096 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PTP4A1Q93096 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC095038.1-201ENST00000429248 1591 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC011369.2-201ENST00000624423 1567 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC009220.2-201ENST00000489759 1751 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 RNU6-1320P-201ENST00000390838 107 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 RNU6-1269P-201ENST00000391139 107 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AL929472.1-201ENST00000417484 429 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 RPS17P17-201ENST00000419392 409 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 ARAFP1-201ENST00000422172 605 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AHCYP8-201ENST00000425108 209 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 HMGB3P10-201ENST00000434734 572 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 BX679664.2-201ENST00000439282 283 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 GAPDHP33-201ENST00000443168 1013 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 RNU6-599P-201ENST00000459383 107 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 RNU6-1193P-201ENST00000459461 107 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC026782.2-201ENST00000510845 636 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 SCARNA5-201ENST00000516201 276 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC008429.2-201ENST00000523057 864 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms