Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL021368.3-201ENST00000607119 578 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 MIR6085-201ENST00000618314 110 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 MIR6849-201ENST00000618543 69 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC090506.2-201ENST00000624521 419 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 LINC02495-203ENST00000636704 242 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC009831.5-201ENST00000624000 3189 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AL353743.3-201ENST00000442109 1468 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AL359976.1-201ENST00000418655 3528 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC005702.3-201ENST00000585345 1447 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 Y_RNA.62-201ENST00000362840 99 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 RNU6-670P-201ENST00000364312 104 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 SNORA7A-201ENST00000384765 139 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AL157884.1-201ENST00000424561 454 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AL445528.1-201ENST00000426330 420 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 MTND4LP7-201ENST00000431728 294 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 H3F3BP1-201ENST00000440551 403 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 RPS10P14-201ENST00000440748 502 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 RPL31P53-201ENST00000457065 348 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 OR9A1P-202ENST00000484361 945 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC010374.2-201ENST00000512933 535 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AL133399.1-201ENST00000527476 298 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC103855.4-201ENST00000533158 265 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC089984.3-201ENST00000552838 363 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 TPRX1P1-201ENST00000557620 319 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AL158211.1-201ENST00000566763 763 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC114477.1-201ENST00000605097 605 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC026979.4-201ENST00000606555 645 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC016957.2-201ENST00000616998 848 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AC006453.5-201ENST00000636451 619 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 FANCD2P2-201ENST00000437591 1400 ntBASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.56□□□□□ -1.36
ATG4AQ8WYN0 AL121768.1-201ENST00000613917 2544 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AL731532.1-201ENST00000623972 4236 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AP001541.1-201ENST00000623322 1904 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 RNU1-5P-201ENST00000362684 144 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 RNU1-84P-201ENST00000365447 164 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 MIR620-201ENST00000385232 95 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 RNU11-6P-201ENST00000391127 133 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC007562.1-201ENST00000421819 517 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms