Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 MAPK10-379ENST00000642013 1385 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC133552.1-201ENST00000569988 4007 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 OR10D1P-201ENST00000355343 936 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 RNA5SP472-201ENST00000363868 119 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 RN7SKP118-201ENST00000364331 330 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 RPL12P1-201ENST00000374520 498 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 MIR152-201ENST00000385212 87 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AL034417.1-201ENST00000399343 800 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 RN7SKP85-201ENST00000411349 318 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 MTCYBP7-201ENST00000419540 1134 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC007064.3-201ENST00000422608 359 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC134879.1-201ENST00000426062 394 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 NPM1P26-201ENST00000426339 738 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 Z85994.2-201ENST00000434327 452 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC245452.2-201ENST00000435222 392 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 BMS1P11-201ENST00000442351 885 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 BMS1P9-201ENST00000457640 885 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 RN7SL149P-201ENST00000465197 281 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 RPS16P9-201ENST00000477220 427 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC093827.1-201ENST00000480094 861 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 OR9N1P-201ENST00000491296 333 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AL135933.1-201ENST00000498657 802 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 DCAF13P2-201ENST00000514188 555 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 SCARNA6-201ENST00000515982 265 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 RNA5SP96-201ENST00000516041 107 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC113191.1-201ENST00000517759 403 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC084337.1-201ENST00000524809 686 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC009268.1-201ENST00000561352 1203 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 MIR4675-201ENST00000577898 77 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC092032.1-201ENST00000603090 165 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC025287.2-201ENST00000621911 668 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AC026108.1-201ENST00000635444 547 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 BRAFP1-201ENST00000445336 2703 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 AL512353.3-201ENST00000417517 1326 ntBASIC5.72□□□□□ -1.49
C11orf88Q6PI97 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
C11orf88Q6PI97 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
C11orf88Q6PI97 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
C11orf88Q6PI97 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
C11orf88Q6PI97 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
C11orf88Q6PI97 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
C11orf88Q6PI97 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.71□□□□□ -1.49
C11orf88Q6PI97 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
C11orf88Q6PI97 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
C11orf88Q6PI97 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.71□□□□□ -1.49
C11orf88Q6PI97 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 RPL24P4-201ENST00000326586 421 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 SNORD8-201ENST00000363915 110 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC104297.1-201ENST00000393779 870 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 RPL10P10-201ENST00000403509 664 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 RN7SKP38-201ENST00000410782 309 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC116036.1-201ENST00000412199 367 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AL157698.1-201ENST00000415190 1011 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 VDAC1P10-201ENST00000416715 891 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms