Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 ITPK1-AS1-201ENST00000553639 4701 ntBASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 RPL35AP24-201ENST00000413846 330 ntBASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 BZW1P1-201ENST00000454901 1240 ntBASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 AC022215.1-201ENST00000481770 362 ntBASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 AC145423.1-201ENST00000605712 336 ntBASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 HOTTIP_3.1-201ENST00000619957 337 ntBASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC9.02□□□□□ -0.97
CDC42BPAQ5VT25 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 AP000866.6-201ENST00000638898 3579 ntBASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 MAPK10-338ENST00000641647 3362 ntBASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 AC015977.1-201ENST00000418887 292 ntBASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 AC004129.2-201ENST00000457229 287 ntBASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 OARD1-211ENST00000480585 829 ntTSL 3 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 AC073610.1-201ENST00000489971 396 ntBASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 CDY5P-201ENST00000411487 1580 ntBASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 CDY9P-201ENST00000451397 1580 ntBASIC9.01□□□□□ -0.97
CDC42BPAQ5VT25 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AC083795.1-201ENST00000491760 320 ntBASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AC073581.1-201ENST00000519036 575 ntBASIC9□□□□□ -0.97
CDC42BPAQ5VT25 MINCR-206ENST00000524335 499 ntTSL 2 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 OFD1P17-201ENST00000437639 3018 ntBASIC9□□□□□ -0.97
CDC42BPAQ5VT25 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 NPM1P22-201ENST00000427761 952 ntBASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AC007204.2-201ENST00000615022 616 ntBASIC9□□□□□ -0.97
CDC42BPAQ5VT25 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CDC42BPAQ5VT25 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 IARS-213ENST00000627121 4587 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 YES1P1-201ENST00000418510 1628 ntBASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 LRRC37A14P-201ENST00000452297 462 ntBASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 RN7SL547P-201ENST00000490793 290 ntBASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms