Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 RPL23AP19-201ENST00000436229 369 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AC007998.1-201ENST00000474156 672 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AC093719.1-201ENST00000480427 441 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AC090958.1-201ENST00000511122 351 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AC020978.7-201ENST00000575953 1187 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AC008555.7-201ENST00000605008 583 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 UGT2B27P-201ENST00000505092 1620 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 OFD1P17-201ENST00000437639 3018 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AC022905.1-201ENST00000503430 3048 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 AC092821.3-202ENST00000641304 2767 ntBASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
SHROOM1Q2M3G4 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AC013488.1-201ENST00000526618 1838 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AL117339.4-201ENST00000608335 7063 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AC006213.6-201ENST00000623722 4179 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 RNU1-150P-201ENST00000362491 162 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 SNORA51.1-201ENST00000363243 140 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 MIR640-201ENST00000385086 96 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AL050335.1-201ENST00000396909 869 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AC245096.1-201ENST00000413104 546 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AC097721.1-201ENST00000427150 1253 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 SEPT14P12-201ENST00000442280 560 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AC011411.1-201ENST00000509592 876 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 PRMT5P1-201ENST00000514351 598 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 RNA5SP271-201ENST00000516700 88 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AC139493.1-201ENST00000604368 397 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AC097467.4-201ENST00000605504 141 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AL445649.1-201ENST00000615941 691 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 AP001541.1-201ENST00000623322 1904 ntBASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHROOM1Q2M3G4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 CCAT2-201ENST00000630920 1752 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 AL449283.1-201ENST00000602631 3403 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 OR52B3P-201ENST00000314715 928 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 RN7SKP81-201ENST00000365603 331 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 RNA5SP156-201ENST00000410250 110 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 RN7SKP206-201ENST00000410823 293 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 RPS14P4-201ENST00000415880 418 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 AK3P5-201ENST00000432033 519 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 GAPDHP75-201ENST00000433910 943 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms