Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK3Q00526 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CDK3Q00526 BIN2P1-201ENST00000504996 1530 ntBASIC6.18□□□□□ -1.42
CDK3Q00526 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
CDK3Q00526 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CDK3Q00526 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK3Q00526 EIF3EP1-201ENST00000433978 1316 ntBASIC6.18□□□□□ -1.42
CDK3Q00526 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK3Q00526 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.18□□□□□ -1.42
CDK3Q00526 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK3Q00526 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK3Q00526 AC105749.1-201ENST00000631338 2008 ntBASIC6.18□□□□□ -1.42
CDK3Q00526 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK3Q00526 AC110716.2-201ENST00000563865 3945 ntBASIC6.18□□□□□ -1.42
CDK3Q00526 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CDK3Q00526 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK3Q00526 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK3Q00526 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CDK3Q00526 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.17□□□□□ -1.42
CDK3Q00526 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CDK3Q00526 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK3Q00526 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CDK3Q00526 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CDK3Q00526 OR7E156P-201ENST00000400303 464 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 AL445238.1-204ENST00000400311 463 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK3Q00526 RPL36P18-201ENST00000419316 318 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 CYP4F30P-202ENST00000420048 405 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 GAPDHP34-201ENST00000432112 823 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 AC069154.1-201ENST00000432914 542 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 AL451136.1-201ENST00000435399 325 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 PNKDP1-201ENST00000435914 430 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 NPM1P48-201ENST00000436002 853 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK3Q00526 AC097463.1-201ENST00000447288 481 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 AC009963.3-201ENST00000458090 486 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.17□□□□□ -1.42
CDK3Q00526 RNU4-18P-201ENST00000516751 149 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 RN7SKP98-201ENST00000517070 156 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK3Q00526 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK3Q00526 PRELID3BP3-201ENST00000584963 545 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK3Q00526 AC087468.1-201ENST00000604365 630 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 AC022106.1-201ENST00000612834 766 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 AL445649.1-201ENST00000615941 691 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK3Q00526 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CDK3Q00526 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.17□□□□□ -1.42
CDK3Q00526 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.17□□□□□ -1.42
CDK3Q00526 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK3Q00526 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
CDK3Q00526 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDK3Q00526 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK3Q00526 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK3Q00526 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK3Q00526 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.16□□□□□ -1.42
CDK3Q00526 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDK3Q00526 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDK3Q00526 AC022507.1-201ENST00000548349 1505 ntBASIC6.16□□□□□ -1.42
CDK3Q00526 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK3Q00526 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK3Q00526 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDK3Q00526 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK3Q00526 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDK3Q00526 STAG3L4-201ENST00000352103 530 ntBASIC6.16□□□□□ -1.42
CDK3Q00526 OR11H13P-201ENST00000359695 979 ntBASIC6.16□□□□□ -1.42
CDK3Q00526 RNA5SP110-201ENST00000362638 115 ntBASIC6.16□□□□□ -1.42
CDK3Q00526 RNA5SP433-201ENST00000364491 114 ntBASIC6.16□□□□□ -1.42
CDK3Q00526 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK3Q00526 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK3Q00526 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.16□□□□□ -1.42
CDK3Q00526 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDK3Q00526 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK3Q00526 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK3Q00526 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK3Q00526 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.16□□□□□ -1.42
CDK3Q00526 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDK3Q00526 OR3D1P-201ENST00000438288 955 ntBASIC6.16□□□□□ -1.42
CDK3Q00526 AMYP1-201ENST00000440059 1023 ntBASIC6.16□□□□□ -1.42
CDK3Q00526 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK3Q00526 RPL5P10-201ENST00000445207 894 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms