Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.24□□□□□ -1.73
RPL39P62891 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC4.24□□□□□ -1.73
RPL39P62891 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.24□□□□□ -1.73
RPL39P62891 AC083837.1-201ENST00000565297 2994 ntBASIC4.24□□□□□ -1.73
RPL39P62891 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RPL39P62891 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RPL39P62891 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RPL39P62891 RNU1-49P-201ENST00000363468 159 ntBASIC4.24□□□□□ -1.73
RPL39P62891 RNA5SP429-201ENST00000363688 109 ntBASIC4.24□□□□□ -1.73
RPL39P62891 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RPL39P62891 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RPL39P62891 AC019178.1-201ENST00000392337 440 ntBASIC4.24□□□□□ -1.73
RPL39P62891 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 RN7SKP121-201ENST00000410842 305 ntBASIC4.24□□□□□ -1.73
RPL39P62891 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC4.24□□□□□ -1.73
RPL39P62891 METTL15P3-201ENST00000415522 1221 ntBASIC4.24□□□□□ -1.73
RPL39P62891 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC4.24□□□□□ -1.73
RPL39P62891 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC4.24□□□□□ -1.73
RPL39P62891 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.24□□□□□ -1.73
RPL39P62891 AC239800.1-201ENST00000442049 719 ntBASIC4.24□□□□□ -1.73
RPL39P62891 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.24□□□□□ -1.73
RPL39P62891 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC4.24□□□□□ -1.73
RPL39P62891 AC073072.2-201ENST00000447425 348 ntBASIC4.24□□□□□ -1.73
RPL39P62891 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC4.24□□□□□ -1.73
RPL39P62891 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 AL133480.2-201ENST00000456723 487 ntBASIC4.24□□□□□ -1.73
RPL39P62891 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
RPL39P62891 RN7SL643P-201ENST00000471845 291 ntBASIC4.24□□□□□ -1.73
RPL39P62891 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 SNRPCP3-201ENST00000474888 476 ntBASIC4.24□□□□□ -1.73
RPL39P62891 SNX18P24-201ENST00000505249 671 ntBASIC4.24□□□□□ -1.73
RPL39P62891 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC4.24□□□□□ -1.73
RPL39P62891 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.24□□□□□ -1.73
RPL39P62891 AC114940.1-201ENST00000512162 1265 ntBASIC4.24□□□□□ -1.73
RPL39P62891 RNA5SP418-201ENST00000515951 117 ntBASIC4.24□□□□□ -1.73
RPL39P62891 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.24□□□□□ -1.73
RPL39P62891 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.24□□□□□ -1.73
RPL39P62891 OR8Q1P-201ENST00000526467 655 ntBASIC4.24□□□□□ -1.73
RPL39P62891 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC4.24□□□□□ -1.73
RPL39P62891 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC4.24□□□□□ -1.73
RPL39P62891 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.24□□□□□ -1.73
RPL39P62891 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.24□□□□□ -1.73
RPL39P62891 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.24□□□□□ -1.73
RPL39P62891 RN7SL131P-201ENST00000579043 256 ntBASIC4.24□□□□□ -1.73
RPL39P62891 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC4.24□□□□□ -1.73
RPL39P62891 AC141002.1-201ENST00000607025 279 ntBASIC4.24□□□□□ -1.73
RPL39P62891 AL591167.1-201ENST00000607321 456 ntBASIC4.24□□□□□ -1.73
RPL39P62891 uc_338.26-201ENST00000612659 160 ntBASIC4.24□□□□□ -1.73
RPL39P62891 MIR6762-201ENST00000613340 86 ntBASIC4.24□□□□□ -1.73
RPL39P62891 AC010998.3-201ENST00000613871 631 ntBASIC4.24□□□□□ -1.73
RPL39P62891 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.24□□□□□ -1.73
RPL39P62891 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.24□□□□□ -1.73
RPL39P62891 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 AL133243.2-201ENST00000610331 1621 ntBASIC4.24□□□□□ -1.73
RPL39P62891 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
RPL39P62891 ADAM24P-201ENST00000398655 2101 ntBASIC4.24□□□□□ -1.73
RPL39P62891 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RPL39P62891 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPL39P62891 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RPL39P62891 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RPL39P62891 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPL39P62891 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms