Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CR383656.1-201ENST00000484916 377 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC090058.1-201ENST00000498788 435 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 DCAF13P2-201ENST00000514188 555 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 BCAS2P1-201ENST00000528022 632 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 OR52K3P-201ENST00000531655 943 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AP002004.1-206ENST00000532441 876 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 AC026458.1-201ENST00000564330 438 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC083837.1-201ENST00000565297 2994 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.24□□□□□ -1.41
NR1H2P55055 AC004232.1-201ENST00000571388 208 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 MTND2P13-201ENST00000577438 1039 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 RN7SL66P-201ENST00000582099 264 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 WDR45BP1-201ENST00000583470 1029 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.24□□□□□ -1.41
NR1H2P55055 AC015722.2-201ENST00000622210 551 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.24□□□□□ -1.41
NR1H2P55055 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.24□□□□□ -1.41
NR1H2P55055 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NR1H2P55055 AC092070.2-203ENST00000598377 3644 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AL359263.1-201ENST00000441188 2796 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.24□□□□□ -1.41
NR1H2P55055 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
NR1H2P55055 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.24□□□□□ -1.41
NR1H2P55055 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
NR1H2P55055 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.24□□□□□ -1.41
NR1H2P55055 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.24□□□□□ -1.41
NR1H2P55055 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.24□□□□□ -1.41
NR1H2P55055 ATP5BP1-201ENST00000411980 1574 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.23□□□□□ -1.41
NR1H2P55055 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NR1H2P55055 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.23□□□□□ -1.41
NR1H2P55055 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
NR1H2P55055 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NR1H2P55055 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NR1H2P55055 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NR1H2P55055 MIR551B-201ENST00000384984 96 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NR1H2P55055 PDCL3P5-201ENST00000398028 722 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 RNA5SP280-201ENST00000411230 115 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.23□□□□□ -1.41
NR1H2P55055 FAM183DP-201ENST00000421987 399 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 AC016908.1-201ENST00000442571 1219 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.23□□□□□ -1.41
NR1H2P55055 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NR1H2P55055 RPSAP7-201ENST00000456871 885 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 RN7SL790P-201ENST00000474043 298 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 OR11I1P-201ENST00000486033 954 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.23□□□□□ -1.41
NR1H2P55055 IGHV1-14-201ENST00000523391 241 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.23□□□□□ -1.41
NR1H2P55055 ACTG1P15-201ENST00000570019 1063 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.23□□□□□ -1.41
NR1H2P55055 SNORD39.2-201ENST00000579995 76 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 MIR5682-201ENST00000584864 76 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 RPS27AP19-201ENST00000597285 458 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 AC093388.1-201ENST00000609166 430 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.23□□□□□ -1.41
NR1H2P55055 AC005393.1-201ENST00000617916 584 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.23□□□□□ -1.41
NR1H2P55055 AC087894.3-201ENST00000623682 349 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 AC018628.1-201ENST00000624147 3819 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 HPVC1-201ENST00000629899 1198 ntBASIC6.23□□□□□ -1.41
NR1H2P55055 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.23□□□□□ -1.41
NR1H2P55055 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NR1H2P55055 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NR1H2P55055 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
NR1H2P55055 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
NR1H2P55055 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.23□□□□□ -1.41
NR1H2P55055 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NR1H2P55055 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NR1H2P55055 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NR1H2P55055 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
NR1H2P55055 AC140134.1-201ENST00000511830 3544 ntBASIC6.22□□□□□ -1.41
NR1H2P55055 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
NR1H2P55055 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NR1H2P55055 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.22□□□□□ -1.41
NR1H2P55055 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
NR1H2P55055 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NR1H2P55055 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NR1H2P55055 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.22□□□□□ -1.41
NR1H2P55055 NLRP3P1-201ENST00000622303 1785 ntBASIC6.22□□□□□ -1.41
NR1H2P55055 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.22□□□□□ -1.41
NR1H2P55055 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.22□□□□□ -1.41
NR1H2P55055 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NR1H2P55055 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NR1H2P55055 SNORA38B-201ENST00000363524 131 ntBASIC6.22□□□□□ -1.41
NR1H2P55055 SNORA27.3-201ENST00000364937 134 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms