Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.59□□□□□ -1.35
LHX1P48742 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.59□□□□□ -1.35
LHX1P48742 AL355355.1-201ENST00000442900 793 ntBASIC6.59□□□□□ -1.35
LHX1P48742 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.59□□□□□ -1.35
LHX1P48742 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.59□□□□□ -1.35
LHX1P48742 AC068228.1-201ENST00000461723 211 ntBASIC6.59□□□□□ -1.35
LHX1P48742 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.59□□□□□ -1.35
LHX1P48742 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.59□□□□□ -1.35
LHX1P48742 CR383658.1-201ENST00000514609 734 ntBASIC6.59□□□□□ -1.35
LHX1P48742 RN7SKP35-201ENST00000517210 151 ntBASIC6.59□□□□□ -1.35
LHX1P48742 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.59□□□□□ -1.35
LHX1P48742 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.59□□□□□ -1.35
LHX1P48742 AC092865.1-201ENST00000544395 1023 ntBASIC6.59□□□□□ -1.35
LHX1P48742 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.59□□□□□ -1.35
LHX1P48742 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.59□□□□□ -1.35
LHX1P48742 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.59□□□□□ -1.35
LHX1P48742 MIR3189-201ENST00000578735 73 ntBASIC6.59□□□□□ -1.35
LHX1P48742 AC027229.1-201ENST00000583887 253 ntBASIC6.59□□□□□ -1.35
LHX1P48742 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.59□□□□□ -1.35
LHX1P48742 NPIPB1P-202ENST00000588786 828 ntBASIC6.59□□□□□ -1.35
LHX1P48742 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.59□□□□□ -1.35
LHX1P48742 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LHX1P48742 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.59□□□□□ -1.35
LHX1P48742 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.59□□□□□ -1.35
LHX1P48742 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LHX1P48742 RFPL4AP6-201ENST00000616792 846 ntBASIC6.59□□□□□ -1.35
LHX1P48742 AC025262.3-201ENST00000623666 360 ntBASIC6.59□□□□□ -1.35
LHX1P48742 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.59□□□□□ -1.35
LHX1P48742 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LHX1P48742 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LHX1P48742 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LHX1P48742 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
LHX1P48742 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
LHX1P48742 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
LHX1P48742 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
LHX1P48742 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
LHX1P48742 AC093225.1-201ENST00000506867 1408 ntBASIC6.59□□□□□ -1.36
LHX1P48742 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.59□□□□□ -1.36
LHX1P48742 AC089998.1-201ENST00000548575 3141 ntBASIC6.59□□□□□ -1.36
LHX1P48742 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX1P48742 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.58□□□□□ -1.36
LHX1P48742 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX1P48742 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX1P48742 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.58□□□□□ -1.36
LHX1P48742 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX1P48742 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LHX1P48742 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
LHX1P48742 RNU1-134P-201ENST00000362935 165 ntBASIC6.58□□□□□ -1.36
LHX1P48742 RN7SKP161-201ENST00000411110 305 ntBASIC6.58□□□□□ -1.36
LHX1P48742 RPS7P8-201ENST00000418311 581 ntBASIC6.58□□□□□ -1.36
LHX1P48742 RPL35AP31-201ENST00000418340 337 ntBASIC6.58□□□□□ -1.36
LHX1P48742 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 SEPT14P12-201ENST00000442280 560 ntBASIC6.58□□□□□ -1.36
LHX1P48742 RPL5P10-201ENST00000445207 894 ntBASIC6.58□□□□□ -1.36
LHX1P48742 AC023818.1-201ENST00000498379 384 ntBASIC6.58□□□□□ -1.36
LHX1P48742 LSM3P4-201ENST00000502948 309 ntBASIC6.58□□□□□ -1.36
LHX1P48742 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.58□□□□□ -1.36
LHX1P48742 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.58□□□□□ -1.36
LHX1P48742 AC022616.2-201ENST00000523185 300 ntBASIC6.58□□□□□ -1.36
LHX1P48742 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.58□□□□□ -1.36
LHX1P48742 AC021269.1-201ENST00000526860 705 ntBASIC6.58□□□□□ -1.36
LHX1P48742 AC005363.1-201ENST00000530779 351 ntBASIC6.58□□□□□ -1.36
LHX1P48742 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.58□□□□□ -1.36
LHX1P48742 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.58□□□□□ -1.36
LHX1P48742 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX1P48742 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.58□□□□□ -1.36
LHX1P48742 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 CYCSP1-201ENST00000604815 315 ntBASIC6.58□□□□□ -1.36
LHX1P48742 AC008555.7-201ENST00000605008 583 ntBASIC6.58□□□□□ -1.36
LHX1P48742 AL512652.1-201ENST00000619006 500 ntBASIC6.58□□□□□ -1.36
LHX1P48742 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.58□□□□□ -1.36
LHX1P48742 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.58□□□□□ -1.36
LHX1P48742 AL359091.1-201ENST00000449048 1734 ntBASIC6.58□□□□□ -1.36
LHX1P48742 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LHX1P48742 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LHX1P48742 AP001541.1-201ENST00000623322 1904 ntBASIC6.58□□□□□ -1.36
LHX1P48742 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
LHX1P48742 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
LHX1P48742 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
LHX1P48742 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.57□□□□□ -1.36
LHX1P48742 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
LHX1P48742 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms