Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 RNA5SP77-201ENST00000365394 120 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 AL445238.1-204ENST00000400311 463 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CSNK1A1P48729 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 Z82198.3-201ENST00000421145 199 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 AC112492.2-201ENST00000432774 1030 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 SOCS5P1-201ENST00000440415 949 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 MORF4-201ENST00000447135 971 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 RN7SL326P-201ENST00000477493 296 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 NACAP5-201ENST00000509863 636 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 SNORA81.2-201ENST00000516868 170 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 AP001804.1-201ENST00000526868 919 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 OR4A6P-201ENST00000534364 970 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 OR4H6P-201ENST00000563771 921 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 NDUFB9P1-201ENST00000604683 510 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 AC011891.2-201ENST00000604949 397 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CSNK1A1P48729 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 AC068769.1-201ENST00000474767 2426 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CSNK1A1P48729 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CSNK1A1P48729 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CSNK1A1P48729 AP003486.1-201ENST00000525716 3994 ntBASIC5.57□□□□□ -1.52
CSNK1A1P48729 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 PSMA6P1-201ENST00000400275 741 ntBASIC5.56□□□□□ -1.52
CSNK1A1P48729 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 SETP9-201ENST00000423837 832 ntBASIC5.56□□□□□ -1.52
CSNK1A1P48729 H3F3BP1-201ENST00000440551 403 ntBASIC5.56□□□□□ -1.52
CSNK1A1P48729 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 OR4D12P-201ENST00000509361 911 ntBASIC5.56□□□□□ -1.52
CSNK1A1P48729 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.56□□□□□ -1.52
CSNK1A1P48729 AC116667.2-201ENST00000641075 823 ntBASIC5.56□□□□□ -1.52
CSNK1A1P48729 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.56□□□□□ -1.52
CSNK1A1P48729 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CSNK1A1P48729 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 AC005261.2-201ENST00000593427 4258 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 LCN1P2-201ENST00000372030 223 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 MIR191-201ENST00000384873 92 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 RN7SKP146-201ENST00000410242 334 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 RNA5SP251-201ENST00000410614 137 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms