Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 NPIPB14P-203ENST00000532298 987 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGCLP35914 DPPA3P2-202ENST00000557188 1219 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGCLP35914 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCLP35914 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.21□□□□□ -1.42
HMGCLP35914 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HMGCLP35914 SMIM12P1-201ENST00000603004 274 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 AC005828.7-201ENST00000607331 556 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 MIR6889-201ENST00000613185 59 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 AL137246.2-201ENST00000613439 662 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 AL138960.1-201ENST00000613838 513 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 AL109924.4-201ENST00000623089 670 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGCLP35914 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCLP35914 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGCLP35914 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HMGCLP35914 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGCLP35914 AL359091.1-201ENST00000449048 1734 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGCLP35914 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCLP35914 SAMMSON-210ENST00000641260 1308 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGCLP35914 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
HMGCLP35914 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGCLP35914 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGCLP35914 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGCLP35914 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 AC011416.1-201ENST00000514947 1732 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HMGCLP35914 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGCLP35914 SNORA70H-201ENST00000383910 135 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 SNORA70J-201ENST00000384182 135 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 YWHAZP6-201ENST00000399764 738 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 RN7SKP108-201ENST00000411367 328 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AL035422.1-201ENST00000414193 397 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGCLP35914 AC007562.1-201ENST00000421819 517 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGCLP35914 CLNS1AP1-201ENST00000435954 682 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 GAPDHP23-201ENST00000444823 993 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AC023274.2-201ENST00000445264 521 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 TIMM8BP2-201ENST00000445940 251 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.2□□□□□ -1.42
HMGCLP35914 RPL12P30-201ENST00000488389 499 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGCLP35914 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGCLP35914 AC108103.1-201ENST00000511286 446 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGCLP35914 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGCLP35914 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HMGCLP35914 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGCLP35914 AP005136.2-201ENST00000583253 1049 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AL359091.2-201ENST00000609303 556 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AL080312.2-201ENST00000613001 630 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 uc_338.31-201ENST00000615595 186 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AP003789.1-201ENST00000617737 605 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AC003992.1-201ENST00000635364 557 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AC111152.1-202ENST00000635848 339 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 OR7A1P-202ENST00000641542 1158 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 AC024651.2-201ENST00000562480 2098 ntBASIC6.2□□□□□ -1.42
HMGCLP35914 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGCLP35914 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGCLP35914 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGCLP35914 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGCLP35914 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HMGCLP35914 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGCLP35914 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGCLP35914 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGCLP35914 AP004289.1-201ENST00000436307 2205 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HMGCLP35914 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGCLP35914 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
HMGCLP35914 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGCLP35914 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGCLP35914 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
HMGCLP35914 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
HMGCLP35914 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 NME1P1-201ENST00000420914 382 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 AL139158.1-201ENST00000424719 340 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 AC092865.3-201ENST00000425390 1026 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms