Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA1P35221 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA1P35221 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CTNNA1P35221 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.61□□□□□ -1.35
CTNNA1P35221 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.61□□□□□ -1.35
CTNNA1P35221 ADAM3B-201ENST00000569937 840 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.61□□□□□ -1.35
CTNNA1P35221 AC027229.1-201ENST00000583887 253 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 RPL7AP69-201ENST00000595306 806 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA1P35221 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.61□□□□□ -1.35
CTNNA1P35221 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.61□□□□□ -1.35
CTNNA1P35221 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA1P35221 AC015799.1-201ENST00000622996 3122 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA1P35221 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA1P35221 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA1P35221 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA1P35221 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CTNNA1P35221 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA1P35221 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA1P35221 Z83820.1-201ENST00000456978 1499 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.6□□□□□ -1.35
CTNNA1P35221 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
CTNNA1P35221 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AL136984.1-201ENST00000607611 1893 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 HDAC1P2-201ENST00000453661 1398 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AP002512.4-202ENST00000641599 4530 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 AL359976.1-201ENST00000418655 3528 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AL121835.1-201ENST00000404250 354 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 AL117344.1-201ENST00000407196 616 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AC015977.1-201ENST00000418887 292 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.6□□□□□ -1.35
CTNNA1P35221 RPL7L1P3-201ENST00000455249 689 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 AC128716.1-201ENST00000475129 166 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 AC016687.1-201ENST00000482574 353 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.6□□□□□ -1.35
CTNNA1P35221 RPA2P3-201ENST00000533268 770 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AC025423.2-201ENST00000537570 439 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.6□□□□□ -1.35
CTNNA1P35221 RPL3P13-201ENST00000550415 216 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.6□□□□□ -1.35
CTNNA1P35221 OR4C49P-201ENST00000563891 900 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 RN7SL32P-201ENST00000580514 281 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC6.6□□□□□ -1.35
CTNNA1P35221 SYPL1P2-201ENST00000582878 727 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.6□□□□□ -1.35
CTNNA1P35221 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 MIR7159-201ENST00000620587 66 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 AC003992.1-201ENST00000635364 557 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AC116667.2-201ENST00000641075 823 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.6□□□□□ -1.35
CTNNA1P35221 RNF19BPY-201ENST00000458209 1550 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 AP001541.1-201ENST00000623322 1904 ntBASIC6.6□□□□□ -1.35
CTNNA1P35221 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CTNNA1P35221 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
CTNNA1P35221 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA1P35221 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.6□□□□□ -1.35
CTNNA1P35221 AC027279.1-201ENST00000568885 4284 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.59□□□□□ -1.35
CTNNA1P35221 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
CTNNA1P35221 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTNNA1P35221 PROS2P-201ENST00000474651 1951 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.59□□□□□ -1.35
CTNNA1P35221 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTNNA1P35221 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.59□□□□□ -1.35
CTNNA1P35221 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CTNNA1P35221 RNA5SP514-201ENST00000363717 111 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 AL445238.1-204ENST00000400311 463 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 RN7SKP151-201ENST00000410230 316 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 279.8 ms