Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.53□□□□□ -1.52
CD40LGP29965 AC022306.1-201ENST00000560489 1562 ntBASIC5.53□□□□□ -1.52
CD40LGP29965 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD40LGP29965 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CD40LGP29965 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD40LGP29965 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD40LGP29965 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CD40LGP29965 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CD40LGP29965 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.52□□□□□ -1.53
CD40LGP29965 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.52□□□□□ -1.53
CD40LGP29965 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CD40LGP29965 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.52□□□□□ -1.53
CD40LGP29965 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.52□□□□□ -1.53
CD40LGP29965 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 SNORA70.5-201ENST00000365519 135 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.52□□□□□ -1.53
CD40LGP29965 MIR433-201ENST00000384837 93 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC5.52□□□□□ -1.53
CD40LGP29965 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.52□□□□□ -1.53
CD40LGP29965 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.52□□□□□ -1.53
CD40LGP29965 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC5.52□□□□□ -1.53
CD40LGP29965 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.52□□□□□ -1.53
CD40LGP29965 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.52□□□□□ -1.53
CD40LGP29965 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.52□□□□□ -1.53
CD40LGP29965 RPS7P4-201ENST00000444127 582 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CD40LGP29965 AC073072.2-201ENST00000447425 348 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.52□□□□□ -1.53
CD40LGP29965 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.52□□□□□ -1.53
CD40LGP29965 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.52□□□□□ -1.53
CD40LGP29965 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.52□□□□□ -1.53
CD40LGP29965 RN7SL456P-201ENST00000469290 295 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 RPL21P42-201ENST00000488408 464 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.52□□□□□ -1.53
CD40LGP29965 GLUD1P3-202ENST00000508551 200 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 TOMM22P4-201ENST00000511318 336 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 AC026774.2-201ENST00000513990 1098 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.52□□□□□ -1.53
CD40LGP29965 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.52□□□□□ -1.53
CD40LGP29965 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC5.52□□□□□ -1.53
CD40LGP29965 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.52□□□□□ -1.53
CD40LGP29965 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.52□□□□□ -1.53
CD40LGP29965 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.52□□□□□ -1.53
CD40LGP29965 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.52□□□□□ -1.53
CD40LGP29965 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.52□□□□□ -1.53
CD40LGP29965 AC011193.2-201ENST00000582638 367 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 AC023206.1-201ENST00000605824 298 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 AC012510.1-201ENST00000607946 759 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 OR51C1P-201ENST00000608504 942 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 AC096708.4-201ENST00000620563 552 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 AC138965.3-201ENST00000623875 498 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 AL356585.10-201ENST00000641883 123 ntBASIC5.52□□□□□ -1.53
CD40LGP29965 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.52□□□□□ -1.53
CD40LGP29965 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CD40LGP29965 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD40LGP29965 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD40LGP29965 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD40LGP29965 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.51□□□□□ -1.53
CD40LGP29965 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.51□□□□□ -1.53
CD40LGP29965 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD40LGP29965 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CD40LGP29965 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD40LGP29965 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CD40LGP29965 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CD40LGP29965 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
CD40LGP29965 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
CD40LGP29965 RNA5SP474-201ENST00000391234 90 ntBASIC5.51□□□□□ -1.53
CD40LGP29965 RNU1-56P-201ENST00000391303 164 ntBASIC5.51□□□□□ -1.53
CD40LGP29965 UBBP1-201ENST00000392399 473 ntBASIC5.51□□□□□ -1.53
CD40LGP29965 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CD40LGP29965 RN7SKP268-201ENST00000411107 316 ntBASIC5.51□□□□□ -1.53
CD40LGP29965 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CD40LGP29965 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.51□□□□□ -1.53
CD40LGP29965 AC079809.1-201ENST00000415468 276 ntBASIC5.51□□□□□ -1.53
CD40LGP29965 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.51□□□□□ -1.53
CD40LGP29965 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.51□□□□□ -1.53
CD40LGP29965 AL663074.2-201ENST00000440621 479 ntBASIC5.51□□□□□ -1.53
CD40LGP29965 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.51□□□□□ -1.53
CD40LGP29965 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CD40LGP29965 AL354714.5-201ENST00000450131 590 ntBASIC5.51□□□□□ -1.53
CD40LGP29965 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.51□□□□□ -1.53
CD40LGP29965 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.51□□□□□ -1.53
CD40LGP29965 EIF3LP2-201ENST00000457262 807 ntBASIC5.51□□□□□ -1.53
CD40LGP29965 IGKV1D-32-201ENST00000517449 318 ntBASIC5.51□□□□□ -1.53
CD40LGP29965 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms