Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.56□□□□□ -1.36
ATF4P18848 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 FLT1-206ENST00000615611 1476 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.56□□□□□ -1.36
ATF4P18848 ZDHHC11B-201ENST00000382776 1116 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
ATF4P18848 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 AL590143.1-201ENST00000405071 138 ntBASIC6.56□□□□□ -1.36
ATF4P18848 RNA5SP203-201ENST00000410451 136 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC6.56□□□□□ -1.36
ATF4P18848 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 RPL36P1-201ENST00000419720 225 ntBASIC6.56□□□□□ -1.36
ATF4P18848 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 PIGX-204ENST00000421265 677 ntTSL 2 BASIC6.56□□□□□ -1.36
ATF4P18848 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 CFL1P7-201ENST00000424759 486 ntBASIC6.56□□□□□ -1.36
ATF4P18848 KIF9-203ENST00000425452 640 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 IFNNP1-201ENST00000429219 553 ntBASIC6.56□□□□□ -1.36
ATF4P18848 RPL31P54-201ENST00000429803 370 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AC244035.1-201ENST00000430042 390 ntBASIC6.56□□□□□ -1.36
ATF4P18848 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.56□□□□□ -1.36
ATF4P18848 USP9YP28-201ENST00000435142 589 ntBASIC6.56□□□□□ -1.36
ATF4P18848 LINC01468-202ENST00000435813 975 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 MTND2P40-201ENST00000436718 841 ntBASIC6.56□□□□□ -1.36
ATF4P18848 NPM1P33-201ENST00000438918 872 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.56□□□□□ -1.36
ATF4P18848 RPS29P3-201ENST00000439929 171 ntBASIC6.56□□□□□ -1.36
ATF4P18848 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 RPS27AP15-201ENST00000447672 466 ntBASIC6.56□□□□□ -1.36
ATF4P18848 LINC01985-201ENST00000450746 436 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 AL591866.1-201ENST00000456162 401 ntBASIC6.56□□□□□ -1.36
ATF4P18848 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC6.56□□□□□ -1.36
ATF4P18848 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 PGBD4P1-201ENST00000473644 407 ntBASIC6.56□□□□□ -1.36
ATF4P18848 FTH1P4-201ENST00000480365 553 ntBASIC6.56□□□□□ -1.36
ATF4P18848 RPL7P6-201ENST00000480903 738 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AC018695.1-201ENST00000484096 664 ntBASIC6.56□□□□□ -1.36
ATF4P18848 NCOR1P1-202ENST00000486162 291 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AC069304.1-201ENST00000491593 704 ntBASIC6.56□□□□□ -1.36
ATF4P18848 RPS6P4-201ENST00000494693 758 ntBASIC6.56□□□□□ -1.36
ATF4P18848 MTND3P5-201ENST00000512798 333 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 MTCYBP20-201ENST00000524239 1129 ntBASIC6.56□□□□□ -1.36
ATF4P18848 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.56□□□□□ -1.36
ATF4P18848 LRTOMT-216ENST00000539271 570 ntTSL 4 BASIC6.56□□□□□ -1.36
ATF4P18848 SOX5-213ENST00000541847 758 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.56□□□□□ -1.36
ATF4P18848 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC6.56□□□□□ -1.36
ATF4P18848 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.56□□□□□ -1.36
ATF4P18848 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC6.56□□□□□ -1.36
ATF4P18848 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 AC025280.1-201ENST00000562393 260 ntTSL 2 BASIC6.56□□□□□ -1.36
ATF4P18848 AC012435.1-202ENST00000568772 240 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AP001178.2-201ENST00000580007 326 ntTSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 AC008734.2-201ENST00000595277 477 ntBASIC6.56□□□□□ -1.36
ATF4P18848 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
ATF4P18848 AC020765.1-201ENST00000604296 328 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AC083862.2-201ENST00000608819 1145 ntBASIC6.56□□□□□ -1.36
ATF4P18848 U91328.4-201ENST00000608919 517 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AC005332.6-201ENST00000613178 446 ntBASIC6.56□□□□□ -1.36
ATF4P18848 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC6.56□□□□□ -1.36
ATF4P18848 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AC119619.1-201ENST00000619728 112 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.56□□□□□ -1.36
ATF4P18848 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AC024580.1-201ENST00000623020 674 ntBASIC6.56□□□□□ -1.36
ATF4P18848 AC127502.3-201ENST00000636170 1206 ntBASIC6.56□□□□□ -1.36
ATF4P18848 MIR193BHG-214ENST00000641765 509 ntBASIC6.56□□□□□ -1.36
ATF4P18848 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
ATF4P18848 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
ATF4P18848 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.56□□□□□ -1.36
ATF4P18848 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.56□□□□□ -1.36
ATF4P18848 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.56□□□□□ -1.36
ATF4P18848 CDY15P-201ENST00000421995 1570 ntBASIC6.56□□□□□ -1.36
ATF4P18848 CDY22P-201ENST00000451423 1554 ntBASIC6.56□□□□□ -1.36
ATF4P18848 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 THAP12P7-201ENST00000520248 2290 ntBASIC6.56□□□□□ -1.36
ATF4P18848 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
ATF4P18848 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.56□□□□□ -1.36
ATF4P18848 AL022323.4-201ENST00000623980 13120 ntBASIC6.56□□□□□ -1.36
ATF4P18848 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ATF4P18848 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
ATF4P18848 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms