Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NCK1P16333 AC025470.1-201ENST00000510053 2032 ntBASIC5.77□□□□□ -1.49
NCK1P16333 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
NCK1P16333 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
NCK1P16333 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.76□□□□□ -1.49
NCK1P16333 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
NCK1P16333 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 AL591135.1-201ENST00000401578 5914 ntBASIC5.76□□□□□ -1.49
NCK1P16333 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
NCK1P16333 RNA5SP375-201ENST00000362975 119 ntBASIC5.76□□□□□ -1.49
NCK1P16333 RNU11-201ENST00000387069 134 ntBASIC5.76□□□□□ -1.49
NCK1P16333 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NCK1P16333 RN7SKP39-201ENST00000410773 322 ntBASIC5.76□□□□□ -1.49
NCK1P16333 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 PTPN2P1-201ENST00000423212 1072 ntBASIC5.76□□□□□ -1.49
NCK1P16333 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.76□□□□□ -1.49
NCK1P16333 AL589794.1-201ENST00000424971 390 ntBASIC5.76□□□□□ -1.49
NCK1P16333 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.76□□□□□ -1.49
NCK1P16333 AC073410.1-201ENST00000435125 589 ntBASIC5.76□□□□□ -1.49
NCK1P16333 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.76□□□□□ -1.49
NCK1P16333 RBMY2AP-201ENST00000445405 1157 ntBASIC5.76□□□□□ -1.49
NCK1P16333 RBMY2CP-201ENST00000448575 1157 ntBASIC5.76□□□□□ -1.49
NCK1P16333 RBMY2DP-202ENST00000448881 1157 ntBASIC5.76□□□□□ -1.49
NCK1P16333 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.76□□□□□ -1.49
NCK1P16333 RN7SL369P-201ENST00000477138 299 ntBASIC5.76□□□□□ -1.49
NCK1P16333 RPS10P28-201ENST00000480396 498 ntBASIC5.76□□□□□ -1.49
NCK1P16333 RNA5SP418-201ENST00000515951 117 ntBASIC5.76□□□□□ -1.49
NCK1P16333 IGHV4-55-201ENST00000520889 368 ntBASIC5.76□□□□□ -1.49
NCK1P16333 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.76□□□□□ -1.49
NCK1P16333 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.76□□□□□ -1.49
NCK1P16333 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.76□□□□□ -1.49
NCK1P16333 AL049779.3-201ENST00000557141 606 ntBASIC5.76□□□□□ -1.49
NCK1P16333 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.76□□□□□ -1.49
NCK1P16333 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.76□□□□□ -1.49
NCK1P16333 SYPL1P2-201ENST00000582878 727 ntBASIC5.76□□□□□ -1.49
NCK1P16333 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.76□□□□□ -1.49
NCK1P16333 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5.76□□□□□ -1.49
NCK1P16333 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.76□□□□□ -1.49
NCK1P16333 AL360012.1-201ENST00000602813 131 ntBASIC5.76□□□□□ -1.49
NCK1P16333 AC012175.1-201ENST00000603755 531 ntBASIC5.76□□□□□ -1.49
NCK1P16333 AC016252.1-201ENST00000609721 474 ntBASIC5.76□□□□□ -1.49
NCK1P16333 AL136097.3-201ENST00000611097 505 ntBASIC5.76□□□□□ -1.49
NCK1P16333 AC022106.1-201ENST00000612834 766 ntBASIC5.76□□□□□ -1.49
NCK1P16333 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.76□□□□□ -1.49
NCK1P16333 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.76□□□□□ -1.49
NCK1P16333 BX284613.1-201ENST00000452221 1641 ntBASIC5.76□□□□□ -1.49
NCK1P16333 AL133243.2-201ENST00000610331 1621 ntBASIC5.76□□□□□ -1.49
NCK1P16333 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.76□□□□□ -1.49
NCK1P16333 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 ICE2P1-201ENST00000512800 1849 ntBASIC5.76□□□□□ -1.49
NCK1P16333 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
NCK1P16333 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NCK1P16333 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.75□□□□□ -1.49
NCK1P16333 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
NCK1P16333 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.75□□□□□ -1.49
NCK1P16333 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NCK1P16333 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NCK1P16333 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.75□□□□□ -1.49
NCK1P16333 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NCK1P16333 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NCK1P16333 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
NCK1P16333 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
NCK1P16333 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.75□□□□□ -1.49
NCK1P16333 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NCK1P16333 SNORA7A-201ENST00000384765 139 ntBASIC5.75□□□□□ -1.49
NCK1P16333 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NCK1P16333 MIR301B-201ENST00000390813 78 ntBASIC5.75□□□□□ -1.49
NCK1P16333 RPL7P58-201ENST00000402913 758 ntBASIC5.75□□□□□ -1.49
NCK1P16333 FTH1P26-201ENST00000406512 701 ntBASIC5.75□□□□□ -1.49
NCK1P16333 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.75□□□□□ -1.49
NCK1P16333 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.75□□□□□ -1.49
NCK1P16333 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.75□□□□□ -1.49
NCK1P16333 AL845321.1-201ENST00000444603 348 ntBASIC5.75□□□□□ -1.49
NCK1P16333 OSTCP1-201ENST00000455507 450 ntBASIC5.75□□□□□ -1.49
NCK1P16333 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.75□□□□□ -1.49
NCK1P16333 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC5.75□□□□□ -1.49
NCK1P16333 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC5.75□□□□□ -1.49
NCK1P16333 AC105391.1-201ENST00000503155 1045 ntBASIC5.75□□□□□ -1.49
NCK1P16333 AC093815.1-201ENST00000508637 280 ntBASIC5.75□□□□□ -1.49
NCK1P16333 RNU6-1334P-201ENST00000516032 105 ntBASIC5.75□□□□□ -1.49
NCK1P16333 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NCK1P16333 OR5D2P-201ENST00000524390 911 ntBASIC5.75□□□□□ -1.49
NCK1P16333 VDAC2P2-201ENST00000544463 901 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms