Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.91□□□□□ -1.14
HOXD8P13378 AC007494.3-201ENST00000624660 743 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 AL357140.4-201ENST00000636827 412 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 AL358913.2-201ENST00000553881 1548 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 AC095038.1-201ENST00000429248 1591 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXD8P13378 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 OR6M2P-202ENST00000641780 2063 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.91□□□□□ -1.14
HOXD8P13378 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.91□□□□□ -1.14
HOXD8P13378 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
HOXD8P13378 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.91□□□□□ -1.14
HOXD8P13378 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
HOXD8P13378 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.9□□□□□ -1.14
HOXD8P13378 Z97832.2-201ENST00000605896 4261 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
HOXD8P13378 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HOXD8P13378 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.9□□□□□ -1.14
HOXD8P13378 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HOXD8P13378 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.9□□□□□ -1.14
HOXD8P13378 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HOXD8P13378 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
HOXD8P13378 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.9□□□□□ -1.14
HOXD8P13378 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HOXD8P13378 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
HOXD8P13378 AC102941.1-201ENST00000567616 1537 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.9□□□□□ -1.14
HOXD8P13378 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.9□□□□□ -1.14
HOXD8P13378 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
HOXD8P13378 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.14
HOXD8P13378 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HOXD8P13378 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
HOXD8P13378 RN7SKP191-201ENST00000364713 306 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 RNA5SP152-201ENST00000365184 110 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 U6.112-201ENST00000384129 70 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 OR6C64P-201ENST00000419708 825 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 PTPN2P1-201ENST00000423212 1072 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC7.9□□□□□ -1.14
HOXD8P13378 RPL5P6-201ENST00000425640 886 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 AL160175.1-201ENST00000428124 247 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.9□□□□□ -1.14
HOXD8P13378 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.9□□□□□ -1.14
HOXD8P13378 DNAJA1P6-201ENST00000437347 354 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 NPM1P9-201ENST00000453156 844 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 AP003385.3-201ENST00000472498 287 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
HOXD8P13378 RPL7P41-201ENST00000485823 957 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 AC068724.1-201ENST00000487100 792 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 LINC00888-204ENST00000487386 421 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 AP005202.1-201ENST00000489915 867 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.9□□□□□ -1.14
HOXD8P13378 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.9□□□□□ -1.14
HOXD8P13378 AC008837.1-201ENST00000511513 412 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
HOXD8P13378 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.9□□□□□ -1.14
HOXD8P13378 AC104417.1-201ENST00000523974 751 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
HOXD8P13378 PDCL2P2-201ENST00000533651 189 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.9□□□□□ -1.14
HOXD8P13378 AC010287.1-201ENST00000566916 357 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 MIR4789-201ENST00000577469 82 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 AC096708.2-201ENST00000577676 512 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.9□□□□□ -1.14
HOXD8P13378 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.9□□□□□ -1.14
HOXD8P13378 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HOXD8P13378 AP002906.1-201ENST00000603405 233 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 AL450489.1-201ENST00000612071 468 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 MIR6889-201ENST00000613185 59 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.9□□□□□ -1.14
HOXD8P13378 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.9□□□□□ -1.14
HOXD8P13378 AC068137.3-201ENST00000639191 341 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 AC073869.6-201ENST00000640656 341 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 AL596275.2-207ENST00000641188 675 ntBASIC7.9□□□□□ -1.14
HOXD8P13378 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
HOXD8P13378 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
HOXD8P13378 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
HOXD8P13378 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.9□□□□□ -1.15
HOXD8P13378 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
HOXD8P13378 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
HOXD8P13378 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
HOXD8P13378 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.9□□□□□ -1.15
HOXD8P13378 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.9□□□□□ -1.15
HOXD8P13378 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
HOXD8P13378 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
HOXD8P13378 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
HOXD8P13378 MTND5P11-201ENST00000511037 1812 ntBASIC7.89□□□□□ -1.15
HOXD8P13378 TRIM51HP-202ENST00000530412 1823 ntBASIC7.89□□□□□ -1.15
HOXD8P13378 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms