Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
UBCP0CG48 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.49□□□□□ -1.53
UBCP0CG48 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UBCP0CG48 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBCP0CG48 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.49□□□□□ -1.53
UBCP0CG48 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBCP0CG48 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.49□□□□□ -1.53
UBCP0CG48 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBCP0CG48 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.48□□□□□ -1.53
UBCP0CG48 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBCP0CG48 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
UBCP0CG48 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.48□□□□□ -1.53
UBCP0CG48 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.48□□□□□ -1.53
UBCP0CG48 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.48□□□□□ -1.53
UBCP0CG48 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBCP0CG48 AL355488.2-201ENST00000609909 2850 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.48□□□□□ -1.53
UBCP0CG48 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UBCP0CG48 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
UBCP0CG48 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 SAMM50P1-201ENST00000455403 1399 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 AC114876.1-201ENST00000490962 1366 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
UBCP0CG48 AC026310.1-201ENST00000396004 378 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 AL445238.1-204ENST00000400311 463 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 AL139100.1-201ENST00000408001 498 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.48□□□□□ -1.53
UBCP0CG48 AC015977.1-201ENST00000418887 292 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.48□□□□□ -1.53
UBCP0CG48 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.48□□□□□ -1.53
UBCP0CG48 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.48□□□□□ -1.53
UBCP0CG48 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.48□□□□□ -1.53
UBCP0CG48 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.48□□□□□ -1.53
UBCP0CG48 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.48□□□□□ -1.53
UBCP0CG48 COL11A2P1-205ENST00000441798 676 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UBCP0CG48 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.48□□□□□ -1.53
UBCP0CG48 RANP2-201ENST00000456833 229 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.48□□□□□ -1.53
UBCP0CG48 AC135999.1-201ENST00000478962 479 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.48□□□□□ -1.53
UBCP0CG48 AL035690.1-201ENST00000490892 383 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.48□□□□□ -1.53
UBCP0CG48 CYP4F27P-201ENST00000514557 494 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 MINOS1P4-201ENST00000515470 318 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.48□□□□□ -1.53
UBCP0CG48 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.48□□□□□ -1.53
UBCP0CG48 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.48□□□□□ -1.53
UBCP0CG48 TPRX1P1-201ENST00000557620 319 ntBASIC5.48□□□□□ -1.53
UBCP0CG48 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.48□□□□□ -1.53
UBCP0CG48 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.48□□□□□ -1.53
UBCP0CG48 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.48□□□□□ -1.53
UBCP0CG48 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.48□□□□□ -1.53
UBCP0CG48 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
UBCP0CG48 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBCP0CG48 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBCP0CG48 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
UBCP0CG48 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UBCP0CG48 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
UBCP0CG48 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
UBCP0CG48 AL136984.1-201ENST00000607611 1893 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
UBCP0CG48 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBCP0CG48 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
UBCP0CG48 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.47□□□□□ -1.53
UBCP0CG48 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBCP0CG48 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
UBCP0CG48 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.47□□□□□ -1.53
UBCP0CG48 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UBCP0CG48 AC116158.1-201ENST00000560231 2129 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBCP0CG48 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBCP0CG48 HDAC1P2-201ENST00000453661 1398 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 AP001541.1-201ENST00000623322 1904 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
UBCP0CG48 RNU1-5P-201ENST00000362684 144 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 SNORD35A-201ENST00000363389 86 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 RNU1-84P-201ENST00000365447 164 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.47□□□□□ -1.53
UBCP0CG48 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.47□□□□□ -1.53
UBCP0CG48 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
UBCP0CG48 U3.23-201ENST00000391132 200 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 AL096800.1-201ENST00000405326 893 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 RN7SKP221-201ENST00000410420 301 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 AC009506.2-201ENST00000420635 840 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.47□□□□□ -1.53
UBCP0CG48 MTND1P10-201ENST00000426108 832 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UBCP0CG48 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.47□□□□□ -1.53
UBCP0CG48 Z83838.1-202ENST00000456225 839 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 RPL7AP30-201ENST00000482859 796 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 AC012123.2-201ENST00000485809 248 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.47□□□□□ -1.53
UBCP0CG48 SCARNA11.1-201ENST00000516918 132 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.47□□□□□ -1.53
UBCP0CG48 IGHV4-55-201ENST00000520889 368 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 OR6M2P-201ENST00000529831 871 ntBASIC5.47□□□□□ -1.53
UBCP0CG48 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.47□□□□□ -1.53
UBCP0CG48 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.47□□□□□ -1.53
UBCP0CG48 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms