Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.79□□□□□ -1.32
TPM1P09493 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.79□□□□□ -1.32
TPM1P09493 DYNLL1P1-201ENST00000595442 269 ntBASIC6.79□□□□□ -1.32
TPM1P09493 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.79□□□□□ -1.32
TPM1P09493 AL137000.1-201ENST00000610528 1244 ntBASIC6.79□□□□□ -1.32
TPM1P09493 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TPM1P09493 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
TPM1P09493 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TPM1P09493 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TPM1P09493 AC016745.2-201ENST00000608834 3443 ntBASIC6.79□□□□□ -1.32
TPM1P09493 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.79□□□□□ -1.32
TPM1P09493 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.79□□□□□ -1.32
TPM1P09493 BCORP1-203ENST00000513194 5093 ntBASIC6.79□□□□□ -1.32
TPM1P09493 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.78□□□□□ -1.32
TPM1P09493 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM1P09493 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM1P09493 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM1P09493 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM1P09493 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
TPM1P09493 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TPM1P09493 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM1P09493 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
TPM1P09493 Y_RNA.209-201ENST00000364156 111 ntBASIC6.78□□□□□ -1.32
TPM1P09493 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
TPM1P09493 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TPM1P09493 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TPM1P09493 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.78□□□□□ -1.32
TPM1P09493 AL672212.1-201ENST00000422246 400 ntBASIC6.78□□□□□ -1.32
TPM1P09493 AL354766.1-201ENST00000423396 542 ntBASIC6.78□□□□□ -1.32
TPM1P09493 AC092106.2-201ENST00000436597 487 ntBASIC6.78□□□□□ -1.32
TPM1P09493 KRT8P51-201ENST00000438938 274 ntBASIC6.78□□□□□ -1.32
TPM1P09493 RPS7P4-201ENST00000444127 582 ntBASIC6.78□□□□□ -1.32
TPM1P09493 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM1P09493 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TPM1P09493 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM1P09493 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM1P09493 AC073594.1-201ENST00000462065 364 ntBASIC6.78□□□□□ -1.32
TPM1P09493 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.78□□□□□ -1.32
TPM1P09493 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.78□□□□□ -1.32
TPM1P09493 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM1P09493 AC093870.1-201ENST00000506837 213 ntBASIC6.78□□□□□ -1.32
TPM1P09493 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.78□□□□□ -1.32
TPM1P09493 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TPM1P09493 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM1P09493 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.78□□□□□ -1.32
TPM1P09493 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.78□□□□□ -1.32
TPM1P09493 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.78□□□□□ -1.32
TPM1P09493 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.78□□□□□ -1.32
TPM1P09493 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.78□□□□□ -1.32
TPM1P09493 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.78□□□□□ -1.32
TPM1P09493 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.78□□□□□ -1.32
TPM1P09493 AC020916.2-201ENST00000591242 360 ntBASIC6.78□□□□□ -1.32
TPM1P09493 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.78□□□□□ -1.32
TPM1P09493 AL049840.6-201ENST00000604583 345 ntBASIC6.78□□□□□ -1.32
TPM1P09493 MAPK10-350ENST00000641777 965 ntBASIC6.78□□□□□ -1.32
TPM1P09493 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
TPM1P09493 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.78□□□□□ -1.32
TPM1P09493 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM1P09493 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.78□□□□□ -1.32
TPM1P09493 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.78□□□□□ -1.32
TPM1P09493 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM1P09493 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
TPM1P09493 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
TPM1P09493 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.77□□□□□ -1.32
TPM1P09493 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.77□□□□□ -1.32
TPM1P09493 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM1P09493 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM1P09493 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM1P09493 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM1P09493 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM1P09493 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM1P09493 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TPM1P09493 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM1P09493 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 MTND1P10-201ENST00000426108 832 ntBASIC6.77□□□□□ -1.33
TPM1P09493 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM1P09493 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.77□□□□□ -1.33
TPM1P09493 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM1P09493 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.77□□□□□ -1.33
TPM1P09493 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM1P09493 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.77□□□□□ -1.33
TPM1P09493 IGHV4-55-201ENST00000520889 368 ntBASIC6.77□□□□□ -1.33
TPM1P09493 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM1P09493 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM1P09493 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM1P09493 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.77□□□□□ -1.33
TPM1P09493 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM1P09493 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 AC073046.2-201ENST00000604756 527 ntBASIC6.77□□□□□ -1.33
TPM1P09493 AL353807.4-201ENST00000604995 257 ntBASIC6.77□□□□□ -1.33
TPM1P09493 SNORA74.4-201ENST00000607595 199 ntBASIC6.77□□□□□ -1.33
TPM1P09493 AC004839.1-201ENST00000610269 501 ntBASIC6.77□□□□□ -1.33
TPM1P09493 AL121985.3-201ENST00000620690 523 ntBASIC6.77□□□□□ -1.33
TPM1P09493 AC018558.4-201ENST00000622153 281 ntBASIC6.77□□□□□ -1.33
TPM1P09493 AC069542.2-201ENST00000624816 216 ntBASIC6.77□□□□□ -1.33
TPM1P09493 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms