Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
CXCL1P09341 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCL1P09341 AC097063.1-201ENST00000426714 1797 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 RNA5SP176-201ENST00000390956 110 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 AC245036.1-201ENST00000391727 309 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC4.71□□□□□ -1.66
CXCL1P09341 SNX18P13-201ENST00000412442 529 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC4.71□□□□□ -1.66
CXCL1P09341 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.71□□□□□ -1.66
CXCL1P09341 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCL1P09341 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCL1P09341 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.71□□□□□ -1.66
CXCL1P09341 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCL1P09341 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC4.71□□□□□ -1.66
CXCL1P09341 AC099340.1-201ENST00000475247 599 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 RN7SL37P-201ENST00000490461 307 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.71□□□□□ -1.66
CXCL1P09341 GLUD1P3-202ENST00000508551 200 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.71□□□□□ -1.66
CXCL1P09341 BCAS2P1-201ENST00000528022 632 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 PDCL3P1-201ENST00000534575 734 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 AC007068.2-201ENST00000543168 395 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 AC068993.1-201ENST00000546724 589 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCL1P09341 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC4.71□□□□□ -1.66
CXCL1P09341 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.71□□□□□ -1.66
CXCL1P09341 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCL1P09341 AC024614.1-201ENST00000577546 307 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 AC027229.1-201ENST00000583887 253 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 AC020916.2-201ENST00000591242 360 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC4.71□□□□□ -1.66
CXCL1P09341 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCL1P09341 PRR13P3-201ENST00000603578 376 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 AL121782.1-201ENST00000611242 413 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 AL161931.1-201ENST00000612768 246 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCL1P09341 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCL1P09341 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
CXCL1P09341 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CXCL1P09341 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.71□□□□□ -1.66
CXCL1P09341 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.71□□□□□ -1.66
CXCL1P09341 AC139426.3-201ENST00000605648 2059 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 AC009962.1-201ENST00000567327 3813 ntBASIC4.71□□□□□ -1.66
CXCL1P09341 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CXCL1P09341 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL1P09341 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 OR2A3P-202ENST00000641249 1776 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 AC090220.1-201ENST00000593078 1699 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 AC144833.1-201ENST00000567953 4089 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.7□□□□□ -1.66
CXCL1P09341 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CXCL1P09341 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CXCL1P09341 MIR99A-201ENST00000384906 81 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 SNORA77.2-201ENST00000408571 112 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 GPS2P1-201ENST00000411761 986 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.7□□□□□ -1.66
CXCL1P09341 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CXCL1P09341 GYG1P2-201ENST00000426437 1006 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 AC027124.1-201ENST00000440852 466 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCL1P09341 RPS23P9-201ENST00000448848 438 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCL1P09341 AL162739.1-201ENST00000450606 307 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 RSU1P1-201ENST00000453416 441 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CXCL1P09341 VPS25P1-201ENST00000455691 508 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCL1P09341 AC023424.1-201ENST00000496058 459 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.7□□□□□ -1.66
CXCL1P09341 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.7□□□□□ -1.66
CXCL1P09341 OR6M2P-201ENST00000529831 871 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 AP006437.1-202ENST00000530327 933 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms