Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.94□□□□□ -1.14
COL3A1P02461 AC099677.3-201ENST00000427081 395 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 AC016027.5-201ENST00000427227 210 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.94□□□□□ -1.14
COL3A1P02461 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.94□□□□□ -1.14
COL3A1P02461 AC004129.2-201ENST00000457229 287 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.94□□□□□ -1.14
COL3A1P02461 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.94□□□□□ -1.14
COL3A1P02461 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC7.94□□□□□ -1.14
COL3A1P02461 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.94□□□□□ -1.14
COL3A1P02461 OR56A7P-201ENST00000524865 941 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 AC006530.1-201ENST00000555980 571 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 AL049779.3-201ENST00000557141 606 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.94□□□□□ -1.14
COL3A1P02461 AC020978.7-201ENST00000575953 1187 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.94□□□□□ -1.14
COL3A1P02461 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.94□□□□□ -1.14
COL3A1P02461 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.94□□□□□ -1.14
COL3A1P02461 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL3A1P02461 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.94□□□□□ -1.14
COL3A1P02461 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.94□□□□□ -1.14
COL3A1P02461 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.94□□□□□ -1.14
COL3A1P02461 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
COL3A1P02461 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL3A1P02461 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL3A1P02461 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.94□□□□□ -1.14
COL3A1P02461 AC061975.7-201ENST00000592016 2692 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL3A1P02461 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.94□□□□□ -1.14
COL3A1P02461 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL3A1P02461 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC7.94□□□□□ -1.14
COL3A1P02461 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.94□□□□□ -1.14
COL3A1P02461 FBXL21-201ENST00000297158 1305 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL3A1P02461 AL031985.1-201ENST00000392713 418 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.94□□□□□ -1.14
COL3A1P02461 RN7SKP151-201ENST00000410230 316 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 AL731534.1-201ENST00000434711 269 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 AL663074.2-201ENST00000440621 479 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 AL122020.1-201ENST00000472287 459 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL3A1P02461 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.94□□□□□ -1.14
COL3A1P02461 SNORD46.2-201ENST00000516021 102 ntBASIC7.94□□□□□ -1.14
COL3A1P02461 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
COL3A1P02461 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.94□□□□□ -1.14
COL3A1P02461 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
COL3A1P02461 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
COL3A1P02461 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.94□□□□□ -1.14
COL3A1P02461 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC7.93□□□□□ -1.14
COL3A1P02461 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL3A1P02461 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
COL3A1P02461 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL3A1P02461 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL3A1P02461 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL3A1P02461 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL3A1P02461 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
COL3A1P02461 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL3A1P02461 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL3A1P02461 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.93□□□□□ -1.14
COL3A1P02461 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL3A1P02461 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL3A1P02461 RPS4XP5-201ENST00000419038 768 ntBASIC7.93□□□□□ -1.14
COL3A1P02461 RPL7L1P3-201ENST00000455249 689 ntBASIC7.93□□□□□ -1.14
COL3A1P02461 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.93□□□□□ -1.14
COL3A1P02461 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.93□□□□□ -1.14
COL3A1P02461 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.93□□□□□ -1.14
COL3A1P02461 RNA5SP271-201ENST00000516700 88 ntBASIC7.93□□□□□ -1.14
COL3A1P02461 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.93□□□□□ -1.14
COL3A1P02461 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.93□□□□□ -1.14
COL3A1P02461 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.93□□□□□ -1.14
COL3A1P02461 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.93□□□□□ -1.14
COL3A1P02461 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.93□□□□□ -1.14
COL3A1P02461 AC015802.2-201ENST00000589690 189 ntBASIC7.93□□□□□ -1.14
COL3A1P02461 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.93□□□□□ -1.14
COL3A1P02461 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.93□□□□□ -1.14
COL3A1P02461 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.92□□□□□ -1.14
COL3A1P02461 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.92□□□□□ -1.14
COL3A1P02461 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
COL3A1P02461 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL3A1P02461 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL3A1P02461 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC7.92□□□□□ -1.14
COL3A1P02461 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
COL3A1P02461 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
COL3A1P02461 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL3A1P02461 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL3A1P02461 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.92□□□□□ -1.14
COL3A1P02461 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL3A1P02461 SNRPEP6-201ENST00000407465 277 ntBASIC7.92□□□□□ -1.14
COL3A1P02461 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.92□□□□□ -1.14
COL3A1P02461 AC093155.2-201ENST00000420734 937 ntBASIC7.92□□□□□ -1.14
COL3A1P02461 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.92□□□□□ -1.14
COL3A1P02461 AP000281.1-201ENST00000444036 316 ntBASIC7.92□□□□□ -1.14
COL3A1P02461 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.92□□□□□ -1.14
COL3A1P02461 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.92□□□□□ -1.14
COL3A1P02461 HMGN2P36-201ENST00000529541 409 ntBASIC7.92□□□□□ -1.14
COL3A1P02461 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.92□□□□□ -1.14
COL3A1P02461 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.92□□□□□ -1.14
COL3A1P02461 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.92□□□□□ -1.14
COL3A1P02461 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.92□□□□□ -1.14
COL3A1P02461 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms