Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL035690.1-201ENST00000490892 383 ntBASIC5.98□□□□□ -1.45
CLDN9O95484 RNA5SP206-201ENST00000516703 121 ntBASIC5.98□□□□□ -1.45
CLDN9O95484 AC008429.4-201ENST00000521201 182 ntBASIC5.98□□□□□ -1.45
CLDN9O95484 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN9O95484 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN9O95484 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN9O95484 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN9O95484 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN9O95484 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.98□□□□□ -1.45
CLDN9O95484 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
CLDN9O95484 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.98□□□□□ -1.45
CLDN9O95484 ARGFXP2-201ENST00000579304 949 ntBASIC5.98□□□□□ -1.45
CLDN9O95484 RN7SL66P-201ENST00000582099 264 ntBASIC5.98□□□□□ -1.45
CLDN9O95484 GLYATL1P2-202ENST00000588046 902 ntBASIC5.98□□□□□ -1.45
CLDN9O95484 AC063977.7-201ENST00000594454 337 ntBASIC5.98□□□□□ -1.45
CLDN9O95484 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN9O95484 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.98□□□□□ -1.45
CLDN9O95484 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN9O95484 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN9O95484 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN9O95484 AL137067.2-201ENST00000621202 131 ntBASIC5.98□□□□□ -1.45
CLDN9O95484 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.98□□□□□ -1.45
CLDN9O95484 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
CLDN9O95484 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.98□□□□□ -1.45
CLDN9O95484 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.98□□□□□ -1.45
CLDN9O95484 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CLDN9O95484 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN9O95484 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.98□□□□□ -1.45
CLDN9O95484 AL591135.1-201ENST00000401578 5914 ntBASIC5.98□□□□□ -1.45
CLDN9O95484 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN9O95484 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN9O95484 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN9O95484 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN9O95484 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN9O95484 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN9O95484 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.97□□□□□ -1.45
CLDN9O95484 AC034229.2-201ENST00000566945 2508 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 ZNF402P-201ENST00000404435 3100 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.97□□□□□ -1.45
CLDN9O95484 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN9O95484 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLDN9O95484 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN9O95484 AC024651.2-201ENST00000562480 2098 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN9O95484 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
CLDN9O95484 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN9O95484 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLDN9O95484 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN9O95484 AC073365.1-203ENST00000641055 1992 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.97□□□□□ -1.45
CLDN9O95484 AL133243.2-201ENST00000610331 1621 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CLDN9O95484 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN9O95484 RNA5SP346-201ENST00000363541 121 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 RNU1-59P-201ENST00000364829 162 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.97□□□□□ -1.45
CLDN9O95484 MTND2P12-201ENST00000417560 1252 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN9O95484 AL354707.3-201ENST00000427308 331 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.97□□□□□ -1.45
CLDN9O95484 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.97□□□□□ -1.45
CLDN9O95484 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.97□□□□□ -1.45
CLDN9O95484 AC092601.1-201ENST00000444526 383 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN9O95484 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.97□□□□□ -1.45
CLDN9O95484 AC073476.1-201ENST00000452854 407 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 AL133351.3-201ENST00000454998 193 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.97□□□□□ -1.45
CLDN9O95484 RN7SL104P-201ENST00000498686 293 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 AC008945.1-201ENST00000505144 499 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 MRPL57P6-201ENST00000506570 309 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.97□□□□□ -1.45
CLDN9O95484 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.97□□□□□ -1.45
CLDN9O95484 RN7SKP67-201ENST00000515905 235 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 Y_RNA.710-201ENST00000516975 110 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.97□□□□□ -1.45
CLDN9O95484 OR4A6P-201ENST00000534364 970 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.97□□□□□ -1.45
CLDN9O95484 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.97□□□□□ -1.45
CLDN9O95484 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.97□□□□□ -1.45
CLDN9O95484 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.97□□□□□ -1.45
CLDN9O95484 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.97□□□□□ -1.45
CLDN9O95484 MIR3157-201ENST00000578688 85 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 AC004890.3-201ENST00000605566 1095 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 AL591167.1-201ENST00000607321 456 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 AL352984.2-201ENST00000611153 546 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 U1.25-201ENST00000614085 162 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 U1.34-201ENST00000618578 162 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 U1.31-201ENST00000620022 160 ntBASIC5.97□□□□□ -1.45
CLDN9O95484 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
CLDN9O95484 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CLDN9O95484 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN9O95484 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.97□□□□□ -1.45
CLDN9O95484 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.97□□□□□ -1.45
CLDN9O95484 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN9O95484 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CLDN9O95484 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN9O95484 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.97□□□□□ -1.45
CLDN9O95484 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.97□□□□□ -1.45
CLDN9O95484 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms