Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RN7SKP129-201ENST00000410288 299 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX2-2O95096 AL360013.1-201ENST00000419031 858 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AC002127.1-201ENST00000421305 225 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NKX2-2O95096 CR848007.2-201ENST00000424918 787 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-2O95096 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
NKX2-2O95096 AC064862.5-201ENST00000440618 334 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AL606490.8-201ENST00000441624 319 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AL022237.1-201ENST00000446663 358 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX2-2O95096 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-2O95096 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-2O95096 RN7SL714P-201ENST00000487050 298 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 RPS26P24-201ENST00000497656 331 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AC138409.2-202ENST00000507274 458 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AC010343.2-201ENST00000510162 224 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-2O95096 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-2O95096 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-2O95096 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX2-2O95096 TDGP1-201ENST00000543961 1229 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX2-2O95096 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-2O95096 WBP1LP11-201ENST00000586141 328 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX2-2O95096 AC005332.4-201ENST00000592752 579 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-2O95096 AL589863.1-201ENST00000595383 631 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX2-2O95096 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.88□□□□□ -1.47
NKX2-2O95096 SNORA74.4-201ENST00000607595 199 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 WBP1LP8-201ENST00000617401 327 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AL138693.1-201ENST00000622219 129 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
NKX2-2O95096 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX2-2O95096 Z83820.1-201ENST00000456978 1499 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX2-2O95096 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NKX2-2O95096 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 AC010401.2-201ENST00000575137 4934 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-2O95096 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX2-2O95096 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX2-2O95096 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-2O95096 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX2-2O95096 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 RNU6-883P-201ENST00000384597 107 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 AL589655.1-201ENST00000405398 482 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 AL358178.1-201ENST00000407698 397 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.87□□□□□ -1.47
NKX2-2O95096 AC017035.1-201ENST00000411999 1115 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 DHFRP2-201ENST00000414224 547 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 AC017019.1-201ENST00000426129 261 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX2-2O95096 EMC3-AS1-205ENST00000438698 534 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.87□□□□□ -1.47
NKX2-2O95096 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-2O95096 GTF2IP14-201ENST00000441415 586 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX2-2O95096 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX2-2O95096 MORF4L1P4-201ENST00000450245 976 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 VPS25P1-201ENST00000455691 508 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.87□□□□□ -1.47
NKX2-2O95096 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 MRPL57P6-201ENST00000506570 309 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX2-2O95096 AC093816.1-201ENST00000515076 913 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX2-2O95096 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-2O95096 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-2O95096 AC135983.3-201ENST00000528049 1226 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX2-2O95096 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX2-2O95096 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
NKX2-2O95096 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.87□□□□□ -1.47
NKX2-2O95096 RN7SL66P-201ENST00000582099 264 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-2O95096 MIR7159-201ENST00000620587 66 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 AL356094.1-201ENST00000624663 1212 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.87□□□□□ -1.47
NKX2-2O95096 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.87□□□□□ -1.47
NKX2-2O95096 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms