Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM1O00151 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM1O00151 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM1O00151 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM1O00151 AC099654.3-201ENST00000447087 1546 ntBASIC6.04□□□□□ -1.44
PDLIM1O00151 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM1O00151 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.03□□□□□ -1.44
PDLIM1O00151 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.03□□□□□ -1.44
PDLIM1O00151 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM1O00151 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.03□□□□□ -1.44
PDLIM1O00151 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PDLIM1O00151 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM1O00151 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PDLIM1O00151 AL359955.1-201ENST00000455242 3275 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PDLIM1O00151 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 RNA5SP350-201ENST00000363298 111 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 RN7SKP130-201ENST00000364924 301 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.03□□□□□ -1.44
PDLIM1O00151 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM1O00151 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 AL022237.1-201ENST00000446663 358 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.03□□□□□ -1.44
PDLIM1O00151 VN1R38P-201ENST00000450265 887 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 AL445687.2-201ENST00000458156 728 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 RN7SL221P-201ENST00000466190 281 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM1O00151 AOX3P-204ENST00000491025 2107 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 AP005902.2-201ENST00000518393 307 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM1O00151 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM1O00151 AP004609.2-201ENST00000532177 190 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM1O00151 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM1O00151 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.03□□□□□ -1.44
PDLIM1O00151 AC091304.4-201ENST00000565703 620 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 AC105036.1-201ENST00000566222 271 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM1O00151 AC006272.2-201ENST00000594725 163 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM1O00151 AL590032.1-201ENST00000604920 252 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 AC022726.2-201ENST00000634673 547 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM1O00151 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 AC022164.1-201ENST00000568767 2673 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 HSPD1P7-201ENST00000447985 1686 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PDLIM1O00151 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 ZNF806-201ENST00000438300 1774 ntBASIC6.03□□□□□ -1.44
PDLIM1O00151 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM1O00151 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM1O00151 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM1O00151 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDLIM1O00151 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDLIM1O00151 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PDLIM1O00151 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDLIM1O00151 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.02□□□□□ -1.45
PDLIM1O00151 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDLIM1O00151 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PDLIM1O00151 RN7SKP191-201ENST00000364713 306 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 CYP4F30P-202ENST00000420048 405 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 AC007562.1-201ENST00000421819 517 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.02□□□□□ -1.45
PDLIM1O00151 E2F6P1-201ENST00000428850 745 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 RPL3P11-201ENST00000434028 1146 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.02□□□□□ -1.45
PDLIM1O00151 E2F6P3-201ENST00000441743 743 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.02□□□□□ -1.45
PDLIM1O00151 AC023274.2-201ENST00000445264 521 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 AC010240.2-201ENST00000445363 1205 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDLIM1O00151 AC063955.1-201ENST00000462872 685 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 RN7SL654P-201ENST00000479178 292 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 RN7SL267P-201ENST00000485107 261 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 RN7SL350P-201ENST00000492591 299 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.02□□□□□ -1.45
PDLIM1O00151 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDLIM1O00151 AC137549.1-201ENST00000514243 533 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 RNU6-513P-201ENST00000516104 104 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.02□□□□□ -1.45
PDLIM1O00151 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.02□□□□□ -1.45
PDLIM1O00151 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.02□□□□□ -1.45
PDLIM1O00151 MIR378C-201ENST00000578683 81 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.02□□□□□ -1.45
PDLIM1O00151 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.02□□□□□ -1.45
PDLIM1O00151 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.02□□□□□ -1.45
PDLIM1O00151 RPS4XP21-201ENST00000603814 750 ntBASIC6.02□□□□□ -1.45
PDLIM1O00151 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms