Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 RNA5SP382-201ENST00000363355 112 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 RNA5SP78-201ENST00000364622 118 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 KRBOX1-201ENST00000383748 674 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC087752.1-201ENST00000391360 558 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL590286.1-201ENST00000404178 291 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC019205.1-201ENST00000421830 730 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC012519.1-201ENST00000424588 610 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL596268.1-201ENST00000427910 1048 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC079781.1-201ENST00000441505 394 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 VNN3-210ENST00000450865 596 ntTSL 4 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 MEF2AP1-201ENST00000454867 863 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 PABPC1P10-201ENST00000464731 381 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC083806.1-201ENST00000468934 316 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 RPS26P6-201ENST00000475156 348 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL355076.1-201ENST00000484315 270 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC124945.1-201ENST00000485133 188 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC022415.1-202ENST00000486612 523 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL049874.2-201ENST00000492636 288 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 BTG4P1-201ENST00000510421 183 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 SNX18P23-201ENST00000510867 677 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC006499.1-201ENST00000511870 850 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC017007.1-201ENST00000511960 415 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 IGLV3-7-201ENST00000522952 271 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AP000619.1-201ENST00000540293 1000 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 NMNAT1P5-201ENST00000559657 841 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 RN7SL321P-201ENST00000581742 299 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 RPL7AP66-201ENST00000588490 801 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 DTNA-220ENST00000590831 847 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 5S_rRNA.23-201ENST00000612086 102 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 MIR6133-201ENST00000617057 108 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 uc_338.24-201ENST00000617802 182 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL353898.2-201ENST00000623000 255 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 ASAH1-229ENST00000636537 1056 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL596275.2-207ENST00000641188 675 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL596275.2-204ENST00000641628 552 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 AL596275.2-206ENST00000641957 626 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 CASC19-204ENST00000641001 2055 ntBASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHKB-CPT1BH3BT56 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AP002800.1-201ENST00000624982 2225 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 KARSP1-201ENST00000451871 1752 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AL606490.2-201ENST00000457562 1330 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC004023.1-201ENST00000561473 1744 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms