Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MTCYBP22-201ENST00000603788 447 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 WBP1LP12-201ENST00000604449 331 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC116651.1-201ENST00000609724 556 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 5S_rRNA.20-201ENST00000612104 118 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AL121873.1-201ENST00000616013 524 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 GPC6-202ENST00000617456 792 ntTSL 3 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC105339.4-201ENST00000624471 737 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC134981.1-201ENST00000628076 348 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC007993.1-201ENST00000621298 2430 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC005539.1-201ENST00000443768 1479 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC108463.3-201ENST00000603748 1482 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 USP48-203ENST00000374732 3037 ntTSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 U3.4-201ENST00000363352 213 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 TAF9BP1-201ENST00000396646 746 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 U3.31-201ENST00000408113 216 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 RN7SKP152-201ENST00000410444 315 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 OR13D3P-201ENST00000412501 937 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 LINC01347-201ENST00000417964 355 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC111200.2-201ENST00000418877 505 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 PAICSP7-201ENST00000419829 962 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 Z99497.1-201ENST00000421282 135 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AL022400.1-201ENST00000423946 935 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC114755.4-201ENST00000439114 443 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AL137074.1-201ENST00000442640 465 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 TXNP3-201ENST00000454560 301 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 TDGF1P6-201ENST00000463873 448 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 RPL7P18-201ENST00000478965 734 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 RN7SL630P-201ENST00000483714 297 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC074386.1-206ENST00000487102 761 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 KLF7P1-201ENST00000490941 1048 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 UGT2A3P7-201ENST00000510485 734 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC106800.2-201ENST00000514009 1103 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 PRELID3BP4-201ENST00000515476 571 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 RNU7-179P-201ENST00000516608 68 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC002428.1-201ENST00000523722 771 ntTSL 3 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 PGAM1P8-201ENST00000526979 453 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 OR9G2P-201ENST00000533326 880 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC048344.2-201ENST00000547280 147 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 THAP2-202ENST00000547843 672 ntTSL 2 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AL121839.1-201ENST00000556233 1185 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 MIR3912-201ENST00000577566 105 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC010463.3-201ENST00000594077 500 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC009955.2-201ENST00000597288 542 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 BNIP3P26-201ENST00000600827 554 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 AC023513.1-201ENST00000604396 691 ntBASIC6.53□□□□□ -1.36
SHISA3A0PJX4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms