Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC021146.7-201ENST00000509604 775 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC034244.2-201ENST00000514668 858 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC005519.1-201ENST00000554490 601 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC091304.4-201ENST00000565703 620 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC106785.4-201ENST00000569492 412 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 MIR3157-201ENST00000578688 85 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 SNORD39.2-201ENST00000579995 76 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC139493.1-201ENST00000604368 397 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC245389.2-201ENST00000616023 576 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 OR8G7P-201ENST00000616658 848 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC242843.1-201ENST00000618702 573 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AL354718.1-201ENST00000619764 589 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AL035425.4-201ENST00000624509 1063 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC092159.4-201ENST00000624944 550 ntBASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL4A3BPQ9Y5P4 AC007485.2-201ENST00000623493 1667 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AL391262.1-201ENST00000556558 1992 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 RNA5SP321-201ENST00000362722 111 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 RN7SKP146-201ENST00000410242 334 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 UBTFL2-201ENST00000411859 1191 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 RPS7P12-201ENST00000422385 582 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 PTP4A1P3-201ENST00000433661 420 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 NPM1P23-201ENST00000440193 849 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 GTF2IP14-201ENST00000441415 586 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 MTND2P6-201ENST00000455337 1030 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 EIF2S2P5-201ENST00000457635 968 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AC004890.1-201ENST00000461005 181 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 LARP7P4-201ENST00000481075 878 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AC138517.1-201ENST00000515724 568 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AC015911.5-201ENST00000587076 451 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AC091133.5-201ENST00000603088 301 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AC068213.1-201ENST00000625124 226 ntBASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
COL4A3BPQ9Y5P4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A3BPQ9Y5P4 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms