Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 RNU5E-10P-201ENST00000363506 118 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 UBBP1-201ENST00000392399 473 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 ZNF37CP-201ENST00000406795 241 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 LUZP4P1-201ENST00000415420 344 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 TCEA1P2-201ENST00000420496 906 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AL672212.1-201ENST00000422246 400 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 RPS7P12-201ENST00000422385 582 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 ZNF965P-201ENST00000432501 817 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 SNRPBP1-201ENST00000443634 282 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 OR52Y1P-201ENST00000452418 828 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 SULT1D1P-201ENST00000458020 882 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC111000.6-201ENST00000514471 709 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC093878.1-201ENST00000515630 432 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 RNU5A-7P-201ENST00000515979 116 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AP002004.1-206ENST00000532441 876 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC089984.3-201ENST00000552838 363 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 GLRXP2-201ENST00000555594 321 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC091304.4-201ENST00000565703 620 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 MIR5095-201ENST00000578844 88 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 RN7SL270P-201ENST00000579643 281 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 MIR3159-201ENST00000584572 74 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AL157392.4-201ENST00000609756 345 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC004241.3-201ENST00000611728 517 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC008759.3-201ENST00000613300 508 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC027559.1-201ENST00000636288 271 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC008691.1-209ENST00000642094 814 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 AL445523.1-201ENST00000451184 1362 ntBASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB4Q9Y5E5 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 AP002833.3-201ENST00000625075 2265 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 CASC19-238ENST00000641523 1558 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 AC121334.1-201ENST00000396414 802 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 AL359694.1-201ENST00000403247 604 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 AL592310.1-201ENST00000414330 671 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 HYALP1-201ENST00000417674 1279 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 MTCO1P51-201ENST00000427672 1060 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 CLNS1AP1-201ENST00000435954 682 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 GAPDHP20-201ENST00000444107 1007 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 SNORD11.1-201ENST00000459482 85 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 AL079303.1-201ENST00000486611 463 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 SUMO2P19-201ENST00000518920 295 ntBASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB4Q9Y5E5 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms