Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 Z68868.1-201ENST00000429048 544 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 NAP1L4P3-201ENST00000432820 1147 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AL590762.3-201ENST00000436372 640 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 RARRES2P3-201ENST00000457739 473 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AL022319.1-201ENST00000458183 1167 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC021074.2-201ENST00000468434 172 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 RPS26P24-201ENST00000497656 331 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC010374.2-201ENST00000512933 535 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 MTATP6P9-201ENST00000515039 680 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC110760.3-202ENST00000515177 371 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC110056.1-201ENST00000525759 911 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC084121.1-201ENST00000533882 835 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AL078601.3-201ENST00000573303 535 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 MIR4502-201ENST00000580432 81 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AL391834.1-201ENST00000609609 560 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC063944.3-201ENST00000609969 533 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 MIR6811-201ENST00000620409 58 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC131009.3-201ENST00000621809 287 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC034229.6-201ENST00000623704 224 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC111152.1-202ENST00000635848 339 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC132825.8-201ENST00000640783 297 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 FABP5P1-201ENST00000423401 411 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC099782.1-201ENST00000425889 474 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AL136455.1-201ENST00000441083 1240 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC068491.1-201ENST00000449539 1241 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AL390728.3-201ENST00000452704 270 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC114322.1-201ENST00000506771 926 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC106806.2-201ENST00000509365 500 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 TPT1P8-201ENST00000510120 555 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC018797.1-201ENST00000510791 255 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 RNA5SP418-201ENST00000515951 117 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 TOMM20P1-201ENST00000534518 427 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AL845552.1-201ENST00000556820 323 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AL356986.1-201ENST00000604085 341 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC138473.1-201ENST00000605717 526 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 uc_338.31-201ENST00000615595 186 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC108359.1-201ENST00000616451 1211 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AL354718.1-201ENST00000619764 589 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC120057.5-201ENST00000623840 154 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC004808.2-201ENST00000627965 773 ntBASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms