Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AP004833.3-201ENST00000531893 322 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC245505.1-201ENST00000556398 224 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC084757.1-201ENST00000559987 490 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC010327.2-201ENST00000587647 488 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC020910.2-201ENST00000603635 610 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 CUX2P1-201ENST00000606426 298 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC243830.2-201ENST00000618067 630 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC124045.1-201ENST00000606008 1953 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 CD86-209ENST00000493101 1572 ntTSL 2 BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDZRN3Q9UPQ7 AC126474.2-201ENST00000623268 1750 ntBASIC9.52□□□□□ -0.88
PDZRN3Q9UPQ7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
PDZRN3Q9UPQ7 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 RNU1-122P-201ENST00000365538 156 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 RNU6-1242P-201ENST00000391052 103 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 SOCS5P5-201ENST00000402732 1586 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 GAS8-AS1-201ENST00000408886 435 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 BCRP8-201ENST00000412037 255 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 ATG4AP1-201ENST00000416893 538 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 ANXA2P2-201ENST00000435128 1020 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 TPMTP4-201ENST00000450749 678 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 SCDP1-201ENST00000455244 1081 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 RBMY2EP-202ENST00000456360 940 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AK4P6-201ENST00000505168 528 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AC022296.2-201ENST00000512424 202 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AC092851.1-201ENST00000535964 478 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AC079171.1-201ENST00000568788 914 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AC091932.1-201ENST00000569381 427 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AC004852.1-201ENST00000605206 154 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AL137246.2-201ENST00000613439 662 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 OR2A20P-201ENST00000479887 2913 ntBASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC9.52□□□□□ -0.89
PDZRN3Q9UPQ7 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC016716.1-201ENST00000265882 708 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 RNA5SP429-201ENST00000363688 109 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 Y_RNA.535-201ENST00000384612 99 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AL356057.1-202ENST00000402263 756 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 RNA5SP177-201ENST00000410122 107 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 MTND4P3-201ENST00000417829 541 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AL022100.1-202ENST00000421214 548 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 MRPS36P1-201ENST00000421291 307 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 OSTCP5-201ENST00000425293 453 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC097721.1-201ENST00000427150 1253 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 MAPRE1P3-201ENST00000435438 796 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC009244.1-201ENST00000450566 258 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms