Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 HMGB1P20-201ENST00000402555 677 ntBASIC7.75□□□□□ -1.17
SCN11AQ9UI33 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 SBDSP1-204ENST00000453858 737 ntBASIC7.75□□□□□ -1.17
SCN11AQ9UI33 UBA52P7-201ENST00000486088 380 ntBASIC7.75□□□□□ -1.17
SCN11AQ9UI33 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.75□□□□□ -1.17
SCN11AQ9UI33 AL049767.1-202ENST00000637826 242 ntBASIC7.75□□□□□ -1.17
SCN11AQ9UI33 AC087269.2-201ENST00000641764 975 ntBASIC7.75□□□□□ -1.17
SCN11AQ9UI33 AC027279.4-201ENST00000624371 2072 ntBASIC7.75□□□□□ -1.17
SCN11AQ9UI33 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 SNRPEP6-201ENST00000407465 277 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 FMO7P-201ENST00000436045 768 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 RPS12P17-201ENST00000438591 377 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 COPS8P2-201ENST00000473228 627 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AL136038.1-201ENST00000497246 351 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 RNU4ATAC-201ENST00000580972 127 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 FAM27E4-201ENST00000605259 342 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 MIR6826-201ENST00000617808 98 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AC130360.2-201ENST00000533477 1556 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AC092821.2-201ENST00000545710 2042 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AC105749.1-201ENST00000631338 2008 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 OR10R3P-201ENST00000361688 942 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 RN7SKP128-201ENST00000364270 303 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 OR3A2-201ENST00000408891 1076 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AC015977.1-201ENST00000418887 292 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 TUBB4BP6-201ENST00000437576 479 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AOX3P-204ENST00000491025 2107 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 WBP1LP3-201ENST00000523033 208 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 OR11H2-202ENST00000641517 1085 ntBASIC7.74□□□□□ -1.17
SCN11AQ9UI33 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SCN11AQ9UI33 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 AC112243.1-201ENST00000623949 3851 ntBASIC7.73□□□□□ -1.17
SCN11AQ9UI33 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.73□□□□□ -1.17
SCN11AQ9UI33 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms