Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 RNU1-5P-201ENST00000362684 144 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AL050335.1-201ENST00000396909 869 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 RN7SKP161-201ENST00000411110 305 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 GAPDHP34-201ENST00000432112 823 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC245452.2-201ENST00000435222 392 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 SNRPBP1-201ENST00000443634 282 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC022415.1-202ENST00000486612 523 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 OR9G2P-201ENST00000533326 880 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC005519.1-201ENST00000554490 601 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC005479.3-201ENST00000602790 431 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AL022394.1-201ENST00000606979 292 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 MIR6885-201ENST00000612241 66 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 MIR6813-201ENST00000621638 56 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AL109924.4-201ENST00000623089 670 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC018692.2-201ENST00000624130 348 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AL035425.4-201ENST00000624509 1063 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 GTF2IP4-201ENST00000453092 2054 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 CAP1P2-201ENST00000417455 1409 ntBASIC5.55□□□□□ -1.52
DUX4Q9UBX2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
DUX4Q9UBX2 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AC099654.3-201ENST00000447087 1546 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 LINC01616-201ENST00000561816 2280 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AC139426.3-201ENST00000605648 2059 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 PPIAP24-201ENST00000328558 471 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 U3.52-201ENST00000384034 216 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AL596268.1-201ENST00000427910 1048 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 NPM1P9-201ENST00000453156 844 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 EIF4E2P2-201ENST00000492033 736 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 RN7SL612P-201ENST00000497704 295 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AL390198.2-201ENST00000510553 222 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 NATP-201ENST00000523491 878 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 NIFKP4-201ENST00000567275 1192 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 ANP32BP1-202ENST00000568553 737 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AC036176.3-201ENST00000602456 418 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AC091133.5-201ENST00000603088 301 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AC002069.2-201ENST00000603580 883 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 RAB28P4-201ENST00000622233 665 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 AC135068.11-201ENST00000636378 921 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 RBPJP6-201ENST00000411556 1431 ntBASIC5.54□□□□□ -1.52
DUX4Q9UBX2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DUX4Q9UBX2 MTCO1P25-201ENST00000414449 1799 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms