Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CLCF1Q9UBD9 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CLCF1Q9UBD9 CDY10P-201ENST00000452415 1567 ntBASIC5.59□□□□□ -1.52
CLCF1Q9UBD9 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLCF1Q9UBD9 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLCF1Q9UBD9 QRSL1P1-201ENST00000400977 1540 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC018717.1-201ENST00000457712 1505 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AL359976.1-201ENST00000418655 3528 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 PARP4P1-201ENST00000435945 2337 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 COX6B1P3-201ENST00000312310 260 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 RNA5SP110-201ENST00000362638 115 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 SNORA51.9-201ENST00000384295 124 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 SNORA11.3-201ENST00000408471 128 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC130360.1-201ENST00000425489 1117 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 OR3D1P-201ENST00000438288 955 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 RPS10P18-201ENST00000442662 495 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 RPL6P30-201ENST00000443382 862 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 HMGN1P2-201ENST00000445197 310 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 PPIAP7-201ENST00000454070 489 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC068228.1-201ENST00000461723 211 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 PRMT5P1-201ENST00000514351 598 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 IGKV3D-25-201ENST00000519599 235 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC130365.2-201ENST00000525882 1201 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AP000620.1-201ENST00000527147 504 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 NDUFA5P11-201ENST00000567995 343 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC007346.1-201ENST00000569208 867 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 MIR4310-201ENST00000582950 57 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 AC092266.1-201ENST00000610958 165 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 SNORA11.6-201ENST00000619030 128 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 MARK2P4-201ENST00000503381 2380 ntBASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLCF1Q9UBD9 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 CCAT2-201ENST00000630920 1752 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 RNU1-49P-201ENST00000363468 159 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 RNA5SP478-201ENST00000364657 115 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC097721.1-201ENST00000427150 1253 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC110602.1-201ENST00000437414 318 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 PPIAP10-201ENST00000438675 458 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 RBMY2AP-201ENST00000445405 1157 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 RBMY2CP-201ENST00000448575 1157 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 RBMY2DP-202ENST00000448881 1157 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 RBMY2BP-202ENST00000451071 1156 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC144530.1-201ENST00000452862 555 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 RBBP4P1-201ENST00000502424 1276 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms