Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRFN1Q9P244 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.22□□□□□ -1.41
LRFN1Q9P244 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
LRFN1Q9P244 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.21□□□□□ -1.41
LRFN1Q9P244 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
LRFN1Q9P244 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
LRFN1Q9P244 AC090181.3-201ENST00000624777 1514 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 RNU6-609P-201ENST00000365459 107 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 AL353692.2-201ENST00000407054 335 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 ELOCP3-201ENST00000439303 348 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 AC016908.1-201ENST00000442571 1219 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 AC245291.3-201ENST00000443400 292 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 RBMY2HP-201ENST00000457961 720 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 RPL7AP23-201ENST00000482625 776 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 AC026826.1-201ENST00000493002 361 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 AC021220.1-201ENST00000507445 630 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 NOP56P3-201ENST00000549457 385 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 ANP32BP1-202ENST00000568553 737 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 AL365223.1-201ENST00000574864 1297 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 GAPDHP41-201ENST00000613707 975 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 SNORA16A-202ENST00000628458 135 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 AL133243.4-201ENST00000623116 3109 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 PARP4P1-201ENST00000435945 2337 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 AL022323.4-201ENST00000623980 13120 ntBASIC6.21□□□□□ -1.42
LRFN1Q9P244 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.21□□□□□ -1.42
LRFN1Q9P244 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRFN1Q9P244 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 RNA5SP321-201ENST00000362722 111 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 RNA5SP140-201ENST00000364524 92 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 RPL5P5-201ENST00000392009 893 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AL391422.1-201ENST00000402155 436 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 VN1R12P-201ENST00000403778 876 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AL590635.1-201ENST00000406314 586 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC017035.1-201ENST00000411999 1115 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AL663061.1-201ENST00000416625 580 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 MARK2P12-201ENST00000420129 585 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 AL121882.1-201ENST00000422893 417 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 SETP9-201ENST00000423837 832 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC093084.1-201ENST00000424233 687 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 RPL5P34-201ENST00000426545 891 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 BX119321.1-201ENST00000428912 797 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 BX119917.1-201ENST00000432517 502 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 GTF2IP14-201ENST00000441415 586 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms