Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SALL4P7-201ENST00000555779 3120 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 MT-RNR1-201ENST00000389680 954 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AC092646.2-201ENST00000431242 2095 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 MAPRE1P3-201ENST00000435438 796 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 EIF5AP4-201ENST00000441206 465 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 AC009963.3-201ENST00000458090 486 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 AC068228.1-201ENST00000461723 211 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AC093225.1-201ENST00000506867 1408 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 SUMO2P7-201ENST00000511179 285 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AC073916.1-201ENST00000545095 130 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 LINC00556-201ENST00000569603 412 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AL365181.4-201ENST00000609800 547 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AC117490.2-201ENST00000610042 594 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 RFPL4AP6-201ENST00000616792 846 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AC022726.2-201ENST00000634673 547 ntBASIC7.14□□□□□ -1.27
COL20A1Q9P218 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.14□□□□□ -1.27
COL20A1Q9P218 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL20A1Q9P218 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL20A1Q9P218 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL20A1Q9P218 HSPD1P9-201ENST00000420325 1636 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL20A1Q9P218 AC022905.1-201ENST00000503430 3048 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL20A1Q9P218 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 LYPLA1P3-201ENST00000402650 695 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 AL353662.1-201ENST00000439099 327 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 AC092967.1-201ENST00000449016 481 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 NFU1-207ENST00000462320 558 ntTSL 4 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 RNA5SP340-201ENST00000517132 107 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 AC027369.2-201ENST00000528030 440 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 TRIM51DP-201ENST00000529746 596 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 AC079905.1-201ENST00000549280 475 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 SETP3-201ENST00000581726 813 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 AP001823.1-201ENST00000604056 1003 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 AC024255.1-201ENST00000614376 102 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 FAM27E2-201ENST00000619668 403 ntBASIC7.13□□□□□ -1.27
COL20A1Q9P218 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL20A1Q9P218 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL20A1Q9P218 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL20A1Q9P218 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL20A1Q9P218 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL20A1Q9P218 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL20A1Q9P218 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 CDY10P-201ENST00000452415 1567 ntBASIC7.12□□□□□ -1.27
COL20A1Q9P218 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.12□□□□□ -1.27
COL20A1Q9P218 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL20A1Q9P218 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms