Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
LRTM1Q9HBL6 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AC015977.1-201ENST00000418887 292 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 GTF3AP6-201ENST00000432585 986 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 RPL5P10-201ENST00000445207 894 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AC016724.1-201ENST00000453215 421 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AL035690.1-201ENST00000490892 383 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 RPL41P2-201ENST00000544920 409 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AC233699.1-201ENST00000569955 1168 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 GLYATL1P2-202ENST00000588046 902 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 MIR6885-201ENST00000612241 66 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AC068213.1-201ENST00000625124 226 ntBASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LRTM1Q9HBL6 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC078880.4-201ENST00000617627 1749 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 SNORA43.1-201ENST00000364863 140 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC092642.1-201ENST00000392417 425 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 RPL21P50-201ENST00000417698 477 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC002127.1-201ENST00000421305 225 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 GPN3P1-201ENST00000423883 535 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 EMC3-AS1-205ENST00000438698 534 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AL031681.1-201ENST00000443304 400 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 RN7SL326P-201ENST00000477493 296 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC008945.1-201ENST00000505144 499 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 CYP4F27P-201ENST00000514557 494 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 OR6M2P-201ENST00000529831 871 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC008055.1-201ENST00000547032 609 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC020916.2-201ENST00000591242 360 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 SNORA74.4-201ENST00000607595 199 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 MIR6778-201ENST00000617912 73 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 MIR6503-201ENST00000622884 86 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 DNM1P47-203ENST00000571780 12667 ntBASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
LRTM1Q9HBL6 ZNF101P1-201ENST00000435701 1720 ntBASIC5.96□□□□□ -1.45
LRTM1Q9HBL6 AL359091.1-201ENST00000449048 1734 ntBASIC5.96□□□□□ -1.45
LRTM1Q9HBL6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.96□□□□□ -1.45
LRTM1Q9HBL6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LRTM1Q9HBL6 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.96□□□□□ -1.45
LRTM1Q9HBL6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LRTM1Q9HBL6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
LRTM1Q9HBL6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
LRTM1Q9HBL6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
LRTM1Q9HBL6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
LRTM1Q9HBL6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
LRTM1Q9HBL6 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms