Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 RNA5SP308-201ENST00000362532 115 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 RNA5SP478-201ENST00000364657 115 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 CXADRP1-201ENST00000398098 1095 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 CYP4F30P-202ENST00000420048 405 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AC017019.1-201ENST00000426129 261 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 MRPS21P3-201ENST00000436696 262 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 ARL5AP3-201ENST00000439327 386 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AC089999.1-201ENST00000460336 374 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 RPL5P33-201ENST00000487833 905 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 COX6B1P4-201ENST00000519826 484 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 RPL3P13-201ENST00000550415 216 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AC007620.3-201ENST00000608131 497 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AC024255.1-201ENST00000614376 102 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 CXADRP3-202ENST00000617265 1100 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRF2Q9HAW0 AC005702.3-201ENST00000585345 1447 ntBASIC6.16□□□□□ -1.42
BRF2Q9HAW0 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 MAPK10-287ENST00000641217 3037 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 WBP11P1-201ENST00000562560 1931 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 SNORD16-201ENST00000362803 99 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AL589655.1-201ENST00000405398 482 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 RNA5SP231-201ENST00000410496 138 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 RN7SKP205-201ENST00000410999 307 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 RNA5SP115-201ENST00000411160 107 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 SEPT7P8-201ENST00000413308 775 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 OR52N3P-201ENST00000413417 934 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AL034379.1-201ENST00000423216 253 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AL445528.1-201ENST00000426330 420 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC083862.1-201ENST00000427378 1242 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 ACTR6P1-201ENST00000514311 1104 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC008126.1-201ENST00000549019 480 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AL121839.1-201ENST00000556233 1185 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC023968.1-201ENST00000560719 475 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 SYPL1P2-201ENST00000582878 727 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC008833.1-201ENST00000611633 691 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AL137246.2-201ENST00000613439 662 ntBASIC6.15□□□□□ -1.42
BRF2Q9HAW0 AC006213.5-201ENST00000619673 288 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms