Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RN7SL32P-201ENST00000580514 281 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 RNU4ATAC-201ENST00000580972 127 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 MAPK10-350ENST00000641777 965 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC42Q96M95 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC42Q96M95 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC079248.1-201ENST00000427568 1546 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 MSL3P1-202ENST00000440028 1468 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC024587.1-201ENST00000505925 2157 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 MIR138-2-201ENST00000384916 84 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 RN7SKP121-201ENST00000410842 305 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 RPL21P50-201ENST00000417698 477 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 AL590399.2-201ENST00000427536 309 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 RPS3AP38-201ENST00000435889 763 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 GAPDHP37-201ENST00000442317 968 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 AL162739.1-201ENST00000450606 307 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 RPL12P31-201ENST00000478433 450 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC124945.1-201ENST00000485133 188 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC090058.1-201ENST00000498788 435 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 SNX18P24-201ENST00000505249 671 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 OR9G2P-201ENST00000533326 880 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 AP001858.2-201ENST00000536213 601 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 NPM1P42-201ENST00000560329 862 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 MIR6736-201ENST00000616799 59 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 BX284613.1-201ENST00000452221 1641 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AC137056.2-201ENST00000624055 1958 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCDC42Q96M95 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC42Q96M95 AL031123.3-201ENST00000623345 1837 ntBASIC6.6□□□□□ -1.35
CCDC42Q96M95 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC42Q96M95 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC42Q96M95 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC42Q96M95 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC42Q96M95 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC42Q96M95 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC42Q96M95 SNORA77.2-201ENST00000408571 112 ntBASIC6.59□□□□□ -1.35
CCDC42Q96M95 AC006509.1-201ENST00000420788 634 ntBASIC6.59□□□□□ -1.35
CCDC42Q96M95 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 SOCS5P1-201ENST00000440415 949 ntBASIC6.59□□□□□ -1.35
CCDC42Q96M95 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC42Q96M95 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 TREML3P-201ENST00000457327 501 ntBASIC6.59□□□□□ -1.35
CCDC42Q96M95 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC42Q96M95 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 AC073648.3-201ENST00000504939 925 ntBASIC6.59□□□□□ -1.35
CCDC42Q96M95 KHDC1P1-201ENST00000511053 508 ntBASIC6.59□□□□□ -1.35
CCDC42Q96M95 RPL41P2-201ENST00000544920 409 ntBASIC6.59□□□□□ -1.35
CCDC42Q96M95 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 AC099777.1-201ENST00000603779 1070 ntBASIC6.59□□□□□ -1.35
CCDC42Q96M95 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC42Q96M95 RN7SL261P-201ENST00000613441 282 ntBASIC6.59□□□□□ -1.35
CCDC42Q96M95 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms