Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.46□□□□□ -1.22
SNED1Q8TER0 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.46□□□□□ -1.22
SNED1Q8TER0 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SNED1Q8TER0 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
SNED1Q8TER0 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
SNED1Q8TER0 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 RNA5SP46-201ENST00000362370 120 ntBASIC7.45□□□□□ -1.22
SNED1Q8TER0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 YWHAEP1-201ENST00000453697 763 ntBASIC7.45□□□□□ -1.22
SNED1Q8TER0 COX6B1P2-201ENST00000489624 230 ntBASIC7.45□□□□□ -1.22
SNED1Q8TER0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 AC006530.1-201ENST00000555980 571 ntBASIC7.45□□□□□ -1.22
SNED1Q8TER0 MIR1273E-201ENST00000581165 102 ntBASIC7.45□□□□□ -1.22
SNED1Q8TER0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 AC006924.1-201ENST00000610750 559 ntBASIC7.45□□□□□ -1.22
SNED1Q8TER0 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 EIF3EP2-201ENST00000423042 1814 ntBASIC7.45□□□□□ -1.22
SNED1Q8TER0 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.45□□□□□ -1.22
SNED1Q8TER0 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
SNED1Q8TER0 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SNED1Q8TER0 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.45□□□□□ -1.22
SNED1Q8TER0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SNED1Q8TER0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SNED1Q8TER0 RN7SKP77-201ENST00000363261 353 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 RPL34P3-201ENST00000421454 338 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 AL139415.1-201ENST00000424862 352 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 NPM1P22-201ENST00000427761 952 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC016027.4-201ENST00000450866 277 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC012254.5-201ENST00000623573 478 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SNED1Q8TER0 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 FO082842.1-201ENST00000423552 1370 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC022905.1-201ENST00000503430 3048 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SNED1Q8TER0 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
SNED1Q8TER0 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SNED1Q8TER0 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SNED1Q8TER0 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SNED1Q8TER0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SNED1Q8TER0 WDR95P-201ENST00000425638 1542 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 RPS15AP30-201ENST00000420976 390 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC023245.1-201ENST00000468501 517 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 CU639417.4-201ENST00000623928 207 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC022919.1-201ENST00000624979 626 ntBASIC7.44□□□□□ -1.22
SNED1Q8TER0 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.44□□□□□ -1.22
SNED1Q8TER0 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 AP002364.1-201ENST00000623330 3386 ntBASIC7.43□□□□□ -1.22
SNED1Q8TER0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNED1Q8TER0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SNED1Q8TER0 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms